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Updated: Feb 28, 2026

Isolation and Genome Analysis of Single Virions using 'Single Virus Genomics'
Published on: May 26, 2013
Isolation and Genomic Characterization of Two Lytic Cutibacterium acnes Phages Defines Two Novel Pahexavirus Species
Anastasia A Vorobeva1, Aleksei M Vorobev1, Peter V Evseev2
1G.N. Gabrichevsky Moscow Research Institute for Epidemiology and Microbiology, 125212 Moscow, Russia.
Abstract:
Bacteriophages are promising antibacterial agents for managing acne vulgaris caused by Cutibacterium acnes, particularly given increasing antibiotic resistance. Here, we isolated and characterized two lytic Cutibacterium phages, NS-ph1 and NS-ph2, from acne lesions. Both bacteriophages exhibited a broad lytic spectrum, with a high activity against 27 C. acnes strains. Adsorption assays indicated rapid attachment and one-step growth experiments revealed latent periods of 4 h (NS-ph1) and 2 h (NS-ph2) and burst sizes of 70 and 59 PFU per infected cell, respectively. After long-term storage at room temperature, both phages retained infectivity for 3 months. Genome sequencing revealed linear dsDNA genomes of 29,490 bp (NS-ph1) and 29,189 bp (NS-ph2) with 51 and 46 predicted ORFs, respectively, and no tRNAs. No genes associated with lysogeny, toxins, or antibiotic resistance were detected. Comparative genomics placed both phages within the genus Pahexavirus. Together, these data expand the diversity of Pahexavirus and provide two well-characterized lytic candidates for further evaluation in anti-acne phage therapy.
Insights
Two novel bacteriophages, NS-ph1 and NS-ph2, were isolated and characterized for their potential as antibacterial agents against acne vulgaris. These lytic phages show broad activity against Cutibacterium acnes, offering a promising alternative to antibiotics.
Area of Science:
- Microbiology
- Virology
- Dermatology
Background:
- Antibiotic resistance in Cutibacterium acnes necessitates alternative acne vulgaris treatments.
- Bacteriophages are viruses that infect bacteria and are being explored as therapeutic agents.
Purpose of the Study:
- To isolate and characterize novel lytic bacteriophages effective against Cutibacterium acnes.
- To evaluate the potential of these bacteriophages for phage therapy in acne management.
Main Methods:
- Isolation of bacteriophages from acne lesions.
- Characterization of lytic activity, adsorption, and growth kinetics.
- Genome sequencing and comparative genomics.
Main Results:
- Two lytic bacteriophages, NS-ph1 and NS-ph2, were identified with broad activity against 27 C. acnes strains.
- Phages demonstrated rapid adsorption, short latent periods (2-4h), and significant burst sizes (59-70 PFU/cell).
- Genome analysis revealed no lysogeny, toxin, or antibiotic resistance genes; phages belong to the Pahexavirus genus.
Conclusions:
- NS-ph1 and NS-ph2 are well-characterized lytic Pahexavirus phages.
- These phages are promising candidates for developing novel anti-acne phage therapies.
- The findings contribute to the understanding of Pahexavirus diversity and phage-based acne treatment.
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