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A Scalable Design for Proximity-Inducing Molecules.

Endri Karaj1,2, Varsha Venkatarangan1,3,4,2, Shaimaa H Sindi1,2

  • 1Chemical Biology and Therapeutics Science, Broad Institute of MIT and Harvard, Cambridge, MA 02142, USA.

Biorxiv : the Preprint Server for Biology
|February 27, 2026
PubMed
Summary
This summary is machine-generated.

We developed GRoup-transfer chimeras for Inducing Proximity (GRIPs), a scalable platform for modifying proteins. GRIPs utilize abundant effector inhibitors to precisely edit post-translational modifications (PTMs) for new therapeutic applications.

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Area of Science:

  • Biochemistry
  • Chemical Biology
  • Molecular Biology

Background:

  • Chimeric molecules, like PROTACs, enable targeted protein modification by linking effector enzymes with proteins-of-interest (POIs).
  • Current chimera technologies face scalability limitations due to reliance on rare, non-inhibitory effector binders.

Purpose of the Study:

  • To develop a scalable and versatile platform for protein post-translational modification (PTM) editing.
  • To engineer novel chimeras using abundant effector inhibitors for enhanced therapeutic applications.

Main Methods:

  • Development of GRoup-transfer chimeras for Inducing Proximity (GRIPs) using effector inhibitors and group-transfer handles.
  • Creation of 6 GRIPs classes across 3 PTMs, testing 16 effector-POI pairs, and a toolbox of 42 group-transfer handles.
  • Utilizing global proteomics to confirm specificity and employing GRIPs in endogenous and tagged protein systems.

Main Results:

  • Demonstrated scalability of GRIPs across diverse PTMs and effector-POI pairs.
  • Confirmed specificity of group transfer and PTM editing via proteomics.
  • Showcased novel functionalities including sustained inhibition, prevention of rebound signaling, and pathway activation in endogenous systems.
  • Achieved condensate formation, pathogenic PTM clearance, and PTM crosstalk initiation in hemi-endogenous systems.

Conclusions:

  • GRIPs offer a scalable and adaptable platform for precise PTM editing.
  • This technology enables new therapeutic strategies by imparting novel functionalities to POI drugs.
  • GRIPs advance the field of targeted protein modification with broad applicability.