HEXIM1/P-TEFb complex controls RNA polymerase II pause release and immediate early gene induction following neuronal
Myo Htet1, Camila Estay-Olmos1, Lan Hu2
1Molecular Pharmacology and Neuroscience, Loyola University Chicago Health Science Center, Maywood, Illinois, USA.
The Journal of Biological Chemistry
|February 27, 2026
Summary
Hexamethylene bisacetamide inducible 1 (HEXIM1) protein complexes regulate gene transcription in neurons. This study reveals HEXIM1
Area of Science:
- Neuroscience
- Molecular Biology
- Gene Regulation
Background:
- Cognitive functions, including memory, depend on new gene transcription in neurons.
- Immediate early genes (IEGs) are crucial for memory and are regulated by a paused RNA polymerase II (RNAP2) state.
- Positive transcription elongation factor b (P-TEFb) releases paused RNAP2, but its activity is modulated by inhibitors like Hexamethylene bisacetamide inducible 1 (HEXIM1).
Purpose of the Study:
- To investigate the role of HEXIM1 in neuronal gene transcription and its connection to cognitive processes.
- To explore the impact of HEXIM1-P-TEFb interactions on immediate early gene (IEG) induction.
- To understand how HEXIM1 influences the poised RNAP2 state in neurons.
Main Methods:
- Correlational analysis of HEXIM1 mRNA levels with cognitive impairment in Alzheimer's disease.
- Investigation of HEXIM1 and IEG induction in murine neuronal cultures following depolarization.
- Experimental modulation of P-TEFb activity via inhibition of its cyclin-dependent kinase 9 (CDK9) subunit.
Main Results:
- Neuronal HEXIM1 mRNA levels correlate with impaired cognition in Alzheimer's disease.
- HEXIM1 is induced in the hippocampus during memory formation and upon neuronal depolarization.
- Calcium influx releases P-TEFb from the HEXIM1 complex, and CDK9 inhibition affects IEG induction during repeated depolarization.
Conclusions:
- HEXIM1, in complex with P-TEFb, plays a critical role in establishing and resetting the poised RNAP2 state in neurons.
- This regulation is essential for the efficient activation of genes involved in synaptic plasticity and memory formation.
- Dysregulation of HEXIM1 may contribute to cognitive deficits observed in conditions like Alzheimer's disease.
Related Concept Videos
Transcription Elongation Factors
14.2K
Transcription elongation is a dynamic process that alters depending upon the sequence heterogeneity of the DNA being transcribed. Hence, it is not surprising that the elongation complex's composition also varies along the way while transcribing a gene.
The transcription elongation is regulated via pausing of RNA polymerase on several occasions during transcription. In bacteria, these halts are necessary because the transcription of DNA into mRNA is coupled to the translation of that mRNA...
The transcription elongation is regulated via pausing of RNA polymerase on several occasions during transcription. In bacteria, these halts are necessary because the transcription of DNA into mRNA is coupled to the translation of that mRNA...
14.2K
Transcription Attenuation in Prokaryotes
18.8K
Transcriptional attenuation occurs when RNA transcription is prematurely terminated due to the formation of a terminator mRNA hairpin structure. Bacteria use these hairpins to regulate the transcription process and control the synthesis of several amino acids including histidine, lysine, threonine, and phenylalanine. Transcription attenuation takes place in the non-coding regions of mRNA.
There are several different mechanisms used to attenuate transcription. In ribosome mediated...
There are several different mechanisms used to attenuate transcription. In ribosome mediated...
18.8K
RNA Polymerase II Accessory Proteins
11.2K
Proteins that regulate transcription can do so either via direct contact with RNA Polymerase or through indirect interactions facilitated by adaptors, mediators, histone-modifying proteins, and nucleosome remodelers. Direct interactions to activate transcription is seen in bacteria as well as in some eukaryotic genes. In these cases, upstream activation sequences are adjacent to the promoters, and the activator proteins interact directly with the transcriptional machinery. For example, in...
11.2K
Chromatin Structure Regulates pre-mRNA Processing
8.3K
In eukaryotic cells, nascent mRNA transcripts need to undergo many post-transcriptional modifications to reach the cell cytoplasm and translate into functional proteins. For a long time, transcription and pre-mRNA processing were considered two independent events that occur sequentially in the cell. However, it has now been well established that transcription and pre-mRNA processing are two simultaneous processes that are precisely regulated inside the cell.
The chromatin structure, especially...
The chromatin structure, especially...
8.3K
Transcription Initiation
21.6K
Initiation is the first step of transcription in eukaryotes. Prokaryotic RNA Polymerase (RNAP) can bind to the template DNA and start transcribing. On the other hand, transcription in eukaryotes requires additional proteins, called transcription factors, to first bind to the promoter region in the DNA template. This binding helps recruit the specific RNAP that can assemble on the DNA and start transcription.
The promoters and enhancers and their accessory proteins allow tight regulation of...
The promoters and enhancers and their accessory proteins allow tight regulation of...
21.6K
Bacterial Transcription
37.3K
RNA polymerase (RNAP) carries out DNA-dependent RNA synthesis in both bacteria and eukaryotes. Bacteria do not have a membrane-bound nucleus. So, transcription and translation occur simultaneously, on the same DNA template.
Transcription can be divided into three main stages, each involving distinct DNA sequences to guide the polymerase. These are:
Transcription can be divided into three main stages, each involving distinct DNA sequences to guide the polymerase. These are:
37.3K


