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Published on: January 12, 2020
Identification of multigene predictors of prognosis in patients with ovarian cancer
Xia Liu1,2,3, Xiaoying Chen1,4, Lihe Jiang5,6
1Key Laboratory of Longevity and Aging-related Diseases of Chinese Ministry of Education, Institute of Neuroscience and Guangxi Key Laboratory of Brain Science, School of Basic Medical Sciences, Guangxi Medical University, Nanning, Guangxi 530021, P.R. China.
Abstract:
The high recurrence and mortality of ovarian cancer (OC) necessitate reliable prognostic tools. As multigene models outperform single-gene markers, they are crucial for advancing clinical decision-making. From 4 microarray datasets (N = 859) and a large OC cohort (N = 1793), we identified 87 overall survival (OS)- and/or progression-free survival (PFS)-associated genes. Multigene models revealed that 25 combinations and 5 combinations predicted at least 5-year OS and 5-year PFS, respectively. Notably, compared with all combinations of 4 randomly selected genes, combinations involving ALDH1A2, DCN, GATA6, and PDGFRA were frequent among the top 20 OS models; 6 combinations predicted at least 50-month OS, and tissue microarray (155 OC samples) analyses confirmed this. Particularly, DCN + GATA6 predicted the longest OS (90 months), with a survival difference of 3 years. Most genes correlated with immune cell abundance, especially macrophage abundance. Overall, these genes/combinations serve as valuable biomarkers to optimize OC clinical management.
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