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RNA Pull-down Procedure to Identify RNA Targets of a Long Non-coding RNA
Published on: April 10, 2018
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The conserved long noncoding RNA LTCONS12135 positively regulates innate immunity in teleost
Yamin Cao1, Xiaoqiong He1, Weiwei Zheng1
1Laboratory of Fish Molecular Immunology, College of Fisheries and Life Science, Shanghai Ocean University, Shanghai, China.
Summary
A novel long noncoding RNA (lncRNA), LTCONS12135, was discovered in miiuy croaker and shown to boost innate immunity. This lncRNA enhances antibacterial and antiviral defenses in aquatic vertebrates.
Area of Science:
- * Immunology
- * Molecular Biology
- * Aquatic Vertebrate Research
Background:
- * Long noncoding RNAs (lncRNAs) are recognized regulators of mammalian innate immunity.
- * Their function in aquatic animal immune responses, particularly antimicrobial and antiviral defenses, remains underexplored.
Purpose of the Study:
- * To identify and characterize novel lncRNAs involved in innate immunity in aquatic animals.
- * To investigate the role of a newly identified lncRNA, LTCONS12135, in the immune response of miiuy croaker (Miichthys miiuy).
Main Methods:
- * Identification of LTCONS12135 in M. miiuy spleen cells (MSpC).
- * Analysis of LTCONS12135 expression following stimulation with lipopolysaccharide (LPS) and polyinosinic:polycytidylic acid (poly(I:C)).
- * Functional validation using zebrafish (Danio rerio) infection models with Vibrio anguillarum and vesicular stomatitis virus (VSV).
Main Results:
- * LTCONS12135 expression was significantly upregulated in MSpC upon LPS and poly(I:C) stimulation.
- * In zebrafish models, LTCONS12135 enhanced pro-inflammatory cytokine and antiviral gene transcription.
- * LTCONS12135 effectively inhibited Vibrio anguillarum and vesicular stomatitis virus (VSV) infection and proliferation.
Conclusions:
- * LTCONS12135 plays a crucial role in both antibacterial and antiviral innate immune responses in miiuy croaker.
- * The findings highlight a conserved immunoregulatory function of lncRNAs in teleost species.
- * Noncoding RNAs are significant in shaping the innate immune system of aquatic vertebrates.
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