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Updated: Mar 6, 2026

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Analyzing Platelet Subpopulations by Multi-color Flow Cytometry
Published on: June 10, 2025
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Characterizing mouse platelet heterogeneity across diverse disease models using spectral flow cytometry and
Deepa Gautam1,2, Emily M Clarke1, Rebecca L Zon1,2,3
1Division of Hematology, Brigham and Women's Hospital, Boston, Massachusetts, USA.
Research and Practice in Thrombosis and Haemostasis
|March 5, 2026
Summary
Researchers developed a mouse flow cytometry panel to analyze platelet subtypes, revealing distinct platelet populations and activation states in disease models. This tool aids in understanding platelet heterogeneity in preclinical research.
Area of Science:
- Hematology
- Immunology
- Preclinical Research
Background:
- Standard platelet assessments overlook critical heterogeneity in platelet subpopulations.
- Platelet subtypes are linked to various diseases, necessitating detailed characterization.
- Mouse models are crucial for preclinical research, but analyzing platelet heterogeneity is challenging.
Purpose of the Study:
- Develop and validate a mouse-specific spectral flow cytometry panel.
- Integrate this panel with a high-dimensional analysis pipeline.
- Characterize platelet subpopulations and activation states in physiological and pathological conditions.
Main Methods:
- Optimized a 12-marker spectral flow cytometry panel.
- Integrated the panel with the PlateletProfiler pipeline for multidimensional analysis.
- Applied the workflow to agonist-induced activation and mouse models of inflammation, myeloproliferative neoplasms, and breast cancer.
Main Results:
- Identified four major platelet subpopulations: resting, primed, aggregatory, and procoagulant.
- Observed distinct changes in platelet subsets across different disease models.
- Noted upregulation of activation and procoagulant markers, and increased reticulated platelets in disease models.
Conclusions:
- The developed workflow provides a robust platform for studying platelet heterogeneity in disease.
- The PlateletProfiler pipeline is adaptable for both mouse and human datasets.
- This research supports broad experimental and translational applications in hematology and immunology.

