Jove
Visualize
Contact Us
JoVE
x logofacebook logolinkedin logoyoutube logo
ABOUT JoVE
OverviewLeadershipBlogJoVE Help Center
AUTHORS
Publishing ProcessEditorial BoardScope & PoliciesPeer ReviewFAQSubmit
LIBRARIANS
TestimonialsSubscriptionsAccessResourcesLibrary Advisory BoardFAQ
RESEARCH
JoVE JournalMethods CollectionsJoVE Encyclopedia of ExperimentsArchive
EDUCATION
JoVE CoreJoVE BusinessJoVE Science EducationJoVE Lab ManualFaculty Resource CenterFaculty Site
Terms & Conditions of Use
Privacy Policy
Policies

Related Concept Videos

Molecular Geometry and Dipole Moments02:36

Molecular Geometry and Dipole Moments

13.6K
The VSEPR theory can be used to determine the electron pair geometries and molecular structures as follows:
13.6K
Bond Dissociation Energy and Activation Energy02:13

Bond Dissociation Energy and Activation Energy

8.6K
Bond energy is the energy required to break a bond homolytically. These values are usually expressed in units of kcal/mol or kJ/mol and are referred to as bond dissociation energies when given for specific bonds or average bond energies when indicated for a given type of bond over many compounds. Firstly, the bond dissociation energy for a single bond is weaker than that of a double bond, which in turn is weaker than that of a triple bond. Secondly, hydrogen forms relatively strong bonds with...
8.6K
π Electron Effects on Chemical Shift: Overview01:27

π Electron Effects on Chemical Shift: Overview

1.5K
An applied magnetic field causes loosely bound π-electrons in organic molecules to circulate, producing a local or induced diamagnetic field over a large spatial volume. As the molecules tumble in solution, the field generated by π-electrons in spherical substituents results in a zero net field. However, the net field generated by π-electrons in non-spherical substituents is not zero. The effect of this induced field depends on the orientation of the molecule with respect to B0,...
1.5K
Atomic Force Microscopy01:08

Atomic Force Microscopy

3.1K
Atomic force microscopy (AFM) is a type of scanning probe microscopy that can analyze topographic details of various specimens like ceramics, glass, polymers, and biological samples. AFM offers over 1000 times more resolution than the optical imaging system. Images generated from AFM are three-dimensional surface profiles, offering an advantage over the flat, two-dimensional images from other imaging techniques.
The AFM Probe
The probe is regarded as the heart of any AFM setup and comprises the...
3.1K

You might also read

Related Articles

Articles linked to this work by shared authors, journal, and citation graph.

Sort by
Same author

Probing the Ultrafast Photodynamics of Dihydroazulene with In Silico Time-Resolved Photoelectron Spectroscopy and Ultrafast Electron Diffraction.

The journal of physical chemistry. A·2026
Same author

Enhancing Molecular Dipole Moment Prediction with Multitask Machine Learning.

The journal of physical chemistry letters·2026
Same author

Femtosecond modulation of electron correlations in a Luttinger liquid.

Science advances·2026
Same author

Complete Active Space Self-Consistent Field with GPU-Accelerated Density Fitting.

Journal of chemical theory and computation·2026
Same author

Accelerating CCSD(T) on Graphical Processing Units (GPUs).

The journal of physical chemistry. A·2026
Same author

High-Performance Semiempirical Excited-State Molecular Dynamics Powered by Graphics Processing Units.

The journal of physical chemistry letters·2026
Same journal

The x-ray absorption spectrum of the propargyl radical C3H3●.

The Journal of chemical physics·2026
Same journal

Transient hydroperoxyalkyl intermediates (•QOOH) in isopentane oxidation. I. Conformer- and isomer-resolved infrared spectra.

The Journal of chemical physics·2026
Same journal

Transient hydroperoxyalkyl intermediates (•QOOH) in isopentane oxidation. II. Isomer-resolved unimolecular dynamics.

The Journal of chemical physics·2026
Same journal

Quantum state-to-state dynamics studies of the C(3P) + OH(X2Π) → CO(a3Π) + H(2S) reaction based on a new HCO(12A″) potential energy surface.

The Journal of chemical physics·2026
Same journal

Time-resolved ultrabroadband far-to-mid-infrared spectroscopy directly reveals doorway-mediated vibrational energy flow in an energetic crystal (β-HMX).

The Journal of chemical physics·2026
Same journal

Anomalous phase behaviors near the multiphase coexistence point in 1-alkyl-3-methylimidazolium ionic liquids.

The Journal of chemical physics·2026
See all related articles
  1. Home
  2. Shadow Excited State Molecular Dynamics With The Δscf Method.
  1. Home
  2. Shadow Excited State Molecular Dynamics With The Δscf Method.

Related Experiment Video

Vibrational Spectra of a N719-Chromophore/Titania Interface from Empirical-Potential Molecular-Dynamics Simulation, Solvated by a Room Temperature Ionic Liquid
08:54

Vibrational Spectra of a N719-Chromophore/Titania Interface from Empirical-Potential Molecular-Dynamics Simulation, Solvated by a Room Temperature Ionic Liquid

Published on: January 25, 2020

6.0K

Shadow excited state molecular dynamics with the ΔSCF method.

O Jonathan Fajen1,2,3, Oscar Grånäs4, Todd J Martínez1,2

  • 1Department of Chemistry and PULSE Institute, Stanford University, Stanford, California 94305, USA.

The Journal of Chemical Physics
|March 5, 2026

View abstract on PubMed

Summary
This summary is machine-generated.

We developed a new shadow excited-state molecular dynamics (ESMD) method using density functional theory. This approach improves computational efficiency, stability, and robustness for excited state dynamics simulations.

More Related Videos

Analyzing Melts and Fluids from Ab Initio Molecular Dynamics Simulations with the UMD Package
06:37

Analyzing Melts and Fluids from Ab Initio Molecular Dynamics Simulations with the UMD Package

Published on: September 17, 2021

5.2K
Exploring Caspase Mutations and Post-Translational Modification by Molecular Modeling Approaches
05:56

Exploring Caspase Mutations and Post-Translational Modification by Molecular Modeling Approaches

Published on: October 13, 2022

1.9K

Related Experiment Videos

Vibrational Spectra of a N719-Chromophore/Titania Interface from Empirical-Potential Molecular-Dynamics Simulation, Solvated by a Room Temperature Ionic Liquid
08:54

Vibrational Spectra of a N719-Chromophore/Titania Interface from Empirical-Potential Molecular-Dynamics Simulation, Solvated by a Room Temperature Ionic Liquid

Published on: January 25, 2020

6.0K
Analyzing Melts and Fluids from Ab Initio Molecular Dynamics Simulations with the UMD Package
06:37

Analyzing Melts and Fluids from Ab Initio Molecular Dynamics Simulations with the UMD Package

Published on: September 17, 2021

5.2K
Exploring Caspase Mutations and Post-Translational Modification by Molecular Modeling Approaches
05:56

Exploring Caspase Mutations and Post-Translational Modification by Molecular Modeling Approaches

Published on: October 13, 2022

1.9K

Area of Science:

  • Computational Chemistry
  • Quantum Chemistry
  • Theoretical Chemistry

Background:

  • Born-Oppenheimer molecular dynamics (MD) is crucial for simulating molecular behavior.
  • Simulating excited-state molecular dynamics (ESMD) presents significant computational challenges.
  • Existing methods often face limitations in accuracy, stability, or computational cost.

Purpose of the Study:

  • To extend the shadow extended Lagrangian Born-Oppenheimer molecular dynamics (ESMD) method for excited state dynamics.
  • To develop a more computationally efficient and robust approach for ESMD.
  • To demonstrate the method's efficacy using self-consistent charge density functional tight binding (SCC-DFTB) theory.

Main Methods:

  • Introduced a shadow ESMD approach replacing iterative solutions with a single-step solution of an approximate shadow excited-state potential.
  • Linearized the energy functional about an approximate excited state density.
  • Propagated the approximate excited-state (charge) density as an additional dynamical variable within an extended Lagrangian framework.
  • Main Results:

    • The shadow ESMD method offers significant improvements in computational cost compared to direct ESMD.
    • The new method demonstrates enhanced stability and robustness over its "exact" counterpart.
    • The implementation in SCC-DFTB theory shows broad generalizability to other electronic structure methods.

    Conclusions:

    • The shadow ESMD method provides a computationally efficient, stable, and robust alternative for excited-state molecular dynamics.
    • This approach is adaptable to various quantum chemistry methods, including ab initio techniques.
    • The findings pave the way for more accurate and accessible simulations of excited-state phenomena.