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Updated: Mar 11, 2026

Millisecond Hydrogen/Deuterium-Exchange Mass Spectrometry for the Study of Alpha-Synuclein Structural Dynamics Under Physiological Conditions
Published on: June 23, 2022
Multiscale Insights into the Ionic-Strength Dependence of α-Synuclein Liquid-Liquid Phase Separation
Chen Chen1, Zeng-Shuai Yan2, Yu-Qiang Ma1
1National Laboratory of Solid State Microstructures and Department of Physics, Collaborative Innovation Center of Advanced Microstructures, Nanjing University, Nanjing, China.
Ionic strength controls alpha-synuclein liquid-liquid phase separation (LLPS). Higher salt concentrations suppress LLPS, while specific regions like the N-terminus drive condensate formation via electrostatic interactions.
Area of Science:
- Biochemistry
- Molecular Biology
- Neuroscience
Background:
- Liquid-liquid phase separation (LLPS) of alpha-synuclein (α-syn) is a critical early event in pathogenic aggregation.
- The precise influence of sequence architecture and ionic strength on α-syn LLPS remains incompletely understood.
Purpose of the Study:
- To investigate how sequence features and ionic strength jointly regulate α-syn LLPS.
- To establish a mechanistic link between molecular dynamics, conformational ensembles, and condensate formation.
Main Methods:
- Utilized multiscale molecular dynamics (MD) simulations, including all-atom and coarse-grained approaches.
- Analyzed the phase-separation behavior of full-length α-syn and its distinct fragments (N-terminal, NAC, C-terminal) across varying NaCl concentrations.
Main Results:
- α-syn LLPS is highly sensitive to ionic strength; low to intermediate NaCl promotes liquid-like condensates with high internal mobility.
- Increased ionic strength attenuates and suppresses LLPS due to weakened electrostatic interactions via screening.
- The N-terminal region robustly phase separates through electrostatic interactions, unlike the NAC and C-terminal fragments.
Conclusions:
- Established a mechanistic link between salt-mediated electrostatic screening, region-specific conformational landscapes, and α-syn condensate formation.
- Demonstrated that solution conditions, particularly ionic strength, can modulate early aggregation events.
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