Review Genomic Hotspot Mining and Characterization for Stable Expression of Therapeutic Protein in Chinese Hamster

Xuefeng Ding1, Yazhou Liu1, Lan Luo1

  • 1School of Life Sciences and Health Engineering, Jiangnan University, Wuxi 214122, P. R. China.

ACS Synthetic Biology
|March 11, 2026
PubMed

Insights

Researchers developed a rapid method to create stable recombinant Chinese hamster ovary (CHO) cell lines for therapeutic protein production. This system identifies genomic hotspots for efficient, long-term expression of foreign proteins.

Area of Science:

  • Biotechnology
  • Genomics
  • Cell Biology

Background:

  • Stable recombinant Chinese hamster ovary (CHO) cell lines are essential for industrial pharmaceutical protein production.
  • Identifying optimal genomic locations for transgene integration is critical for consistent protein expression.

Purpose of the Study:

  • To establish a systematic method for identifying genomic hotspots in CHO cells for exogenous protein expression.
  • To construct stable recombinant CHO cell strains utilizing identified hotspots.

Main Methods:

  • Lentiviral random integration reporter gene system was used to obtain four stable monoclonal cell lines (1b7, 1d2, 2d9, 2f7).
  • Chromosome mapping identified specific integration sites for each cell line.
  • CRISPR/Cas9 technology and Bxb1 recombinase-mediated cassette exchange were employed for stable integration.
  • Promoter capture technology was utilized for exogenous protein expression.

Main Results:

  • Four stable integration sites were identified on chromosomes 1, 3, and 5.
  • Recombinant CHO cells capable of long-term stable foreign protein expression were successfully developed.
  • The entire construction process, from screening to stable cell line development, was completed within 2-3 weeks.

Conclusions:

  • The developed systematic method efficiently identifies genomic hotspots for stable protein expression in CHO cells.
  • The combined application of CRISPR/Cas9 and Bxb1 recombinase facilitates rapid construction of high-performance recombinant CHO cell lines.
  • This approach significantly accelerates the timeline for producing therapeutic proteins using engineered cell lines.