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Published on: March 29, 2017
ULK4 and CDKN2A polymorphisms influence the risk of developing monoclonal gammopathy of undetermined significance
José Manuel Sánchez-Maldonado1,2,3, Angelica Macauda3, Antonio José Cabrera-Serrano1,2
1Genomic Oncology Area, GENYO, Centre for Genomics and Oncological Research: Pfizer/University of Granada/Andalusian Regional Government, PTS, Granada, Spain.
Abstract:
Monoclonal gammopathy of undetermined significance (MGUS) is a necessary precursor condition to multiple myeloma (MM). Given the role of autophagy in modulating MM risk, we investigated whether genetic variation in autophagy-related genes influences susceptibility to MGUS. We analyzed the association of 34,042 common autophagy-related single nucleotide polymorphisms (SNPs) with MGUS across six independent cohorts, five from Europe and one from North America, comprising 2317 MGUS cases and 282,358 controls. We also assessed their impact on immune parameters, including absolute counts of 91 blood-derived immune cell subsets and 103 circulating immunological proteins. Meta-analysis revealed a genome-wide significant association between the ULK4rs6599175C allele and increased MGUS risk (p = 3.35 × 10-8). Carriers of this allele showed reduced counts of memory B cell subsets (IgM+CD38+CD27+ and IgD+IgM+CD27+; p = .0038 and p = .0056, respectively) and natural effector B cells (CD24+CD38+IgD+IgM+ cells; p = .0060). Although these associations were not statistically significant after multiple testing correction, they suggest a role of ULK4 in early B-cell differentiation. Additionally, the CDKN2Ars2811710 variant showed a suggestive association with MGUS risk (p = 2.17 × 10-4), affecting transcription factor binding involved in B-cell proliferation and differentiation, although it lacked association with immune markers. In conclusion, we confirm a genome-wide significant association of the ULK4 locus and MGUS risk, supporting its role in early B-cell differentiation, and identify CDKN2A as a candidate susceptibility locus warranting further investigation.
Insights
Genetic variations in autophagy-related genes influence Monoclonal Gammopathy of Undetermined Significance (MGUS) risk. A ULK4 gene variant (rs6599175C) is significantly associated with increased MGUS risk and altered B-cell counts.
Area of Science:
- Genetics
- Immunology
- Cancer Biology
Background:
- Monoclonal gammopathy of undetermined significance (MGUS) is a precursor to multiple myeloma (MM).
- Autophagy plays a role in modulating MM risk.
- Genetic factors influencing MGUS susceptibility are not fully understood.
Purpose of the Study:
- To investigate the association between genetic variations in autophagy-related genes and MGUS risk.
- To explore the impact of these genetic variations on immune parameters.
Main Methods:
- Genome-wide association study of 34,042 autophagy-related single nucleotide polymorphisms (SNPs).
- Analysis across six independent cohorts (2317 MGUS cases, 282,358 controls).
- Assessment of immune cell subsets and circulating immunological proteins.
Main Results:
- A genome-wide significant association was found between the ULK4 rs6599175C allele and increased MGUS risk (p=3.35×10⁻⁸).
- Carriers of this allele showed reduced counts of specific memory B cell subsets and natural effector B cells.
- A suggestive association was observed for the CDKN2A rs2811710 variant with MGUS risk.
Conclusions:
- The ULK4 locus is significantly associated with MGUS risk, suggesting a role in early B-cell differentiation.
- The CDKN2A locus is a potential candidate for further investigation in MGUS susceptibility.
- Genetic variations in autophagy-related genes may influence the transition from MGUS to multiple myeloma.
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