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SoyCountNet: a deep learning framework for counting and locating soybean seeds in field environment
Fei Liu1,2, Qiong Wu1, Haoyu Wang1
1College of Science and Information Science, Qingdao Agricultural University, Qingdao, China.
Frontiers in Plant Science
|March 13, 2026
Summary
SoyCountNet accurately counts soybean seeds per plant (SPP) in fields using deep learning. This automated method improves yield estimation and cultivar evaluation in challenging agricultural conditions.
Area of Science:
- Agricultural Science
- Computer Vision
- Machine Learning
Background:
- Accurate soybean seed counting and spatial localization (Seeds Per Plant - SPP) are crucial for yield estimation and cultivar evaluation.
- Field conditions present challenges like complex backgrounds, pod occlusion, and uneven grain filling, hindering traditional counting methods.
Purpose of the Study:
- To develop SoyCountNet, a deep learning framework for automatic soybean seed counting and localization at the single-plant level in field conditions.
- To enhance the accuracy and robustness of soybean seed quantification for agricultural applications.
Main Methods:
- Utilized a field-based phenotyping platform and optimized the Point-to-Point Network (P2PNet).
- Employed a VGG19_BN backbone and Super Token Sampling Vision Transformer (SViT) for feature extraction.
- Integrated Efficient Channel Attention (ECA) for feature fusion and an improved loss function for enhanced precision and spatial consistency.
Main Results:
- SoyCountNet outperformed existing methods on a field soybean dataset.
- Achieved a Mean Absolute Error (MAE) of 4.61, Root Mean Square Error (RMSE) of 6.03, and R² of 0.94.
- Demonstrated consistent performance across different soybean cultivars for reliable SPP estimates.
Conclusions:
- SoyCountNet provides a reliable and scalable solution for precise soybean seed counting and localization in complex field environments.
- The lightweight architecture facilitates deployment on intelligent agricultural platforms for high-throughput phenotyping and precision breeding.
- This work supports the advancement of intelligent and sustainable agricultural technologies.

