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Updated: Mar 15, 2026

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Differential Labeling of Cell-surface and Internalized Proteins after Antibody Feeding of Live Cultured Neurons
Published on: February 12, 2014
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Endocytome profiling uncovers cell-surface protein dynamics underlying neuronal connectivity.
Colleen N McLaughlin1, Hui Ji1, Katherine X Dong1
1Department of Biology, Howard Hughes Medical Institute, Stanford University, Stanford, CA 94305, USA.
Neuron
|March 13, 2026
Summary
We developed endocytome profiling to map cell-surface protein dynamics during neural development. This method revealed how endocytosis shapes neuronal connections and identified signaling pathways critical for axon targeting.
Area of Science:
- Neuroscience
- Cell Biology
- Proteomics
Background:
- Endocytosis is crucial for neuronal function, remodeling the cell surface proteome.
- The global impact of endocytosis on neural circuit development remains poorly understood.
Purpose of the Study:
- To systematically map cell-surface protein dynamics during neural development using a cell-type-specific approach.
- To investigate the role of endocytosis in axon pruning and targeting.
Main Methods:
- Developed endocytome profiling, a quantitative proteomic method.
- Analyzed developing Drosophila olfactory receptor neuron (ORN) axons.
- Integrated multi-omic data.
Main Results:
- Generated an endocytic atlas of over 1,000 proteins.
- Demonstrated precise endosome-to-surface protein ratio regulation for axon pruning and integrity.
- Identified transcellular signaling pathways regulating axon targeting via receptor endocytosis.
Conclusions:
- Endocytome profiling offers unprecedented access to cell-surface proteome dynamics.
- This approach provides a platform for dissecting proteome-scale remodeling in various cell types.
- Endocytosis plays a critical role in orchestrating neural circuit development.
Keywords:
Drosophilaaxon targetingcell-surface proteinendosomeolfactory receptor neuronproteomicsproximity labelingremodeling
