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Covalent Fragment Screening Using the Quantitative Irreversible Tethering Assay
Published on: February 28, 2025
Targeting protein-protein interactions with reversible covalent modalities: Non-cysteine chemistries
Ruchira Basu1, Steven Fletcher1
1Department of Pharmaceutical Sciences, University of Maryland School of Pharmacy, Baltimore, Maryland, USA.
Reversible covalent drugs targeting protein-protein interactions (PPIs) are advancing beyond cysteine. New strategies focusing on serine and lysine offer enhanced selectivity and sustained engagement for difficult-to-drug targets.
Area of Science:
- Medicinal Chemistry
- Chemical Biology
- Drug Discovery
Background:
- Protein-protein interactions (PPIs) are crucial for cellular functions and are key therapeutic targets.
- Covalent drug design, particularly reversible modulators, offers advantages for engaging challenging PPI targets.
- Cysteine is a common target for reversible covalent drugs, but limitations necessitate exploring alternative chemistries.
Purpose of the Study:
- To review emerging reversible electrophile-nucleophile chemistries for modulating PPIs.
- To highlight the potential of serine and lysine as alternative nucleophilic targets beyond cysteine.
- To explore case studies demonstrating novel reversible covalent strategies for PPI modulation.
Main Methods:
- Literature review of reversible covalent drug design strategies.
- Analysis of electrophile-nucleophile reactions involving amino acid residues.
- Examination of case studies in PPI modulation using diverse covalent chemistries.
Main Results:
- Reversible covalent modulators provide sustained engagement and selectivity for PPI targets.
- Serine and lysine represent promising alternative nucleophilic targets for covalent drug development.
- Expanding beyond cysteine-based strategies broadens the scope for PPI targeting.
Conclusions:
- Emerging reversible covalent chemistries targeting serine and lysine hold significant potential for modulating challenging PPIs.
- Diversifying covalent drug strategies beyond cysteine can overcome limitations and unlock new therapeutic opportunities.
- This review provides a foundation for developing novel covalent therapeutics against PPIs.
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