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MiniFAST: a sensitive and fast miniaturized microscope for in vivo neural recording
Jill Juneau1,2, Guillaume Duret1, Joshua P Chu1
1Rice University, Department of Electrical and Computer Engineering, Houston, Texas, United States.
Neurophotonics
|March 16, 2026
Summary
This study introduces MiniFAST, a high-speed, high-sensitivity miniaturized microscope. It enhances neural imaging capabilities for neuroscience research, enabling faster and clearer observation of brain activity.
Area of Science:
- Neuroscience
- Biomedical Engineering
- Microscopy
Background:
- Observing neural activity in vivo is crucial for understanding brain function.
- Current miniaturized microscopes have limitations in frame rate, sensitivity, and resolution.
- Emerging neural indicators like genetically encoded voltage indicators (GEVIs) require high-speed imaging.
Purpose of the Study:
- To integrate an advanced CMOS image sensor into an open-source miniaturized microscope platform.
- To develop a microscope with enhanced capabilities for neural imaging.
Main Methods:
- Integration of an advanced CMOS image sensor into a miniaturized microscope.
- Development of MiniFAST, a microscope with 1080p video, 1.5 μm resolution, and up to 500 Hz frame rates.
- High gain capability (up to 70 dB) for low-light imaging.
Main Results:
- Achieved ~300-Hz in vivo imaging of freely behaving mice using GCaMP6f.
- Demonstrated high-speed 500-Hz in vitro imaging of a GEVI.
- Successfully performed in vivo GEVI imaging in head-fixed mice.
Conclusions:
- MiniFAST significantly extends miniaturized microscope capabilities.
- The developed microscope offers improvements in high-speed imaging, sensitivity, and resolution.
- This advancement supports broader applications in neuroscience research.
Keywords:
Sony STARVISgenetically encoded calcium indicatorsgenetically encoded voltage indicatorshippocampusminiaturized microscopesneuroengineering toolsopen-source
