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Site-specific Bacterial Chromosome Engineering: ΦC31 Integrase Mediated Cassette Exchange (IMCE)
Published on: March 16, 2012
Potential dissemination of IncHI2/IncHI2A plasmids carrying mcr-9.4 complex transposon in chicken-derived
Panpan Liu1,2, Mengke Ru3, Baocheng Hao3
1State Key Laboratory of Animal Disease Control and Prevention, College of Veterinary Medicine, Lanzhou Veterinary Research Institute, Lanzhou University, Chinese Academy of Agricultural Sciences, Lanzhou, China.
Abstract:
The escalating global prevalence of antimicrobial resistance(AMR) represents a critical public health challenge, particularly concerning the compromised efficacy of polymyxins-essential therapeutic agents against carbapenem-resistant Gram-negative pathogens. This crisis is exacerbated by the plasmid-mediated horizontal gene transfer mechanism, which facilitates the inter-reservoir dissemination of resistance determinants across anthropogenic, zoogenic, and environmental microbiomes. This study investigated a multidrug-resistant Enterobacter hormaechei strain GS32 isolated from a deceased 180-day-old laying hen. Antimicrobial susceptibility testing, whole-genome sequencing, and comparative genomics were employed to analyze resistance profiles, plasmid architecture, and genetic mobility. Conjugation assays assessed plasmid transferability. Results revealed E. hormaechei GS32 harbored a 255 kb IncHI2/IncHI2A plasmid carrying mcr-9.4(pGS32-1) within a conserved transposon (IS1R-qseB/qseC-wbuC-mcr-9.4-IS903B) alongside 14 additional resistance genes [e.g., tet(D), mph(A), and sul2] and heavy metal resistance determinants. The pGS32-1 demonstrated high similarity to those in Salmonella spp. and Citrobacter freundii, suggesting cross-species transmission. Conjugation to EC600 occurred efficiently (frequency: [7.92 ± 0.75] × 10-²). To our knowledge, the present study provides the first evidence of the presence of an IncHI2 carrying mcr-9.4 in E. hormaechei isolated from poultry. The pGS32-1 was frequently found in Enterobacter sp. (including E. hormaechei and Enterobacter cloacae), Salmonella sp., and other bacteria such as C. freundii and Leclercia adecarboxylata, indicating the cross-species transmission capability of IncHI2 plasmids, highlighting its role in disseminating polymyxin resistance across ecological niches. These findings underscore the urgent need for enhanced antimicrobial resistance surveillance in livestock and stricter antibiotic stewardship to mitigate the emergence of a multidrug-resistant pathogen under the One Health framework.IMPORTANCEPolymyxin, as the last-line therapeutic agent against carbapenem-resistant Gram-negative bacterial infections, is facing increasing clinical challenges due to the emergence of novel resistance mechanisms. In this study, a strain of Enterobacter hormaechei GS32 harboring an IncHI2/IncHI2A-type plasmid (pGS32-1) was isolated from deceased laying hens. This plasmid carries a multidrug resistance gene cluster, including mcr-9.4, and exhibits high-efficiency conjugative transfer capability. The mcr-9.4 gene is located within a conserved transposon structure (IS1R-qseB/qseC-wbuC-mcr-9.4-IS903B), colocalized with other resistance genes on the plasmid, suggesting its potential integration as a more complex transposon substructure into this plasmid type. Previous studies have demonstrated that IncHI2-type plasmids are predominantly distributed among Enterobacteriaceae species such as Klebsiella pneumoniae and Salmonella spp. Notably, pGS32-1 exhibits high homology with plasmids identified in Salmonella spp. and Citrobacter freundii, indicating the cross-species transmission potential of IncHI2/IncHI2A-type plasmids and their role in expanding the reservoir of resistance genes.
Insights
A multidrug-resistant Enterobacter hormaechei strain from poultry carried a plasmid with the mcr-9.4 gene, facilitating polymyxin resistance spread. This highlights the need for enhanced antimicrobial resistance surveillance in livestock.
Area of Science:
- Microbiology
- Genetics
- Public Health
Background:
- Antimicrobial resistance (AMR), particularly to polymyxins, is a growing global health threat.
- Plasmid-mediated horizontal gene transfer accelerates the spread of resistance genes.
- Carbapenem-resistant Gram-negative pathogens pose a significant challenge to current treatments.
Purpose of the Study:
- To investigate a multidrug-resistant Enterobacter hormaechei strain (GS32) isolated from a laying hen.
- To analyze the resistance profiles, plasmid architecture, and genetic mobility of the isolate.
- To assess the transferability of resistance genes via conjugation assays.
Main Methods:
- Antimicrobial susceptibility testing.
- Whole-genome sequencing and comparative genomics.
- Conjugation assays to determine plasmid transfer frequency.
Main Results:
- E. hormaechei GS32 harbored a 255 kb IncHI2/IncHI2A plasmid (pGS32-1) containing the mcr-9.4 gene within a conserved transposon.
- The plasmid also carried 14 additional resistance genes and heavy metal resistance determinants.
- pGS32-1 showed high similarity to plasmids in Salmonella spp. and Citrobacter freundii, with efficient conjugation transfer.
Conclusions:
- First evidence of IncHI2 plasmid carrying mcr-9.4 in poultry-derived E. hormaechei.
- IncHI2 plasmids demonstrate cross-species transmission potential, disseminating polymyxin resistance.
- Urgent need for enhanced livestock AMR surveillance and antibiotic stewardship under the One Health framework.

