Related Experiment Video
Updated: Mar 18, 2026

An In Vitro Bladder Model of Catheter-Associated Urinary Tract Infection
Published on: June 24, 2025
Evaluating hypothetical interventions effects on hospital-acquired infection outcomes with stacked probability
Jean-Pierre Gnimatin1,2, Marlon Grodd1,2, Susanne Weber1,2
1Institute of Medical Biometry and Statistics, Faculty of Medicine and Medical Center, University of Freiburg, Freiburg, Germany.
Background:
Hospital-acquired infections (HAIs), contribute to increased morbidity, prolonged hospital stays, and higher healthcare costs. Evaluating intervention effects in dynamic clinical settings requires advanced modeling techniques. This study presents HAISim and StaViC, two interactive R Shiny apps designed to support decision-making in Infection Prevention and Control.
Methods:
A six-state extended illness-death multistate model was built with a time-constant transition hazard assumption. The multistate model maps patient trajectories involving healthcare-associated infections as an intermediate event, and mortality and discharge as absorbing events in order to describe the time-dependent dynamics within hospitals. Using two settings, we simulated the implementation of hypothetical treatments by modifying hazard rates: Setting 1 (improved treatment intervention only) and Setting 2 (combined enhanced treatment and infection prevention). These were used to create the interactive and user-friendly R Shiny Apps HAISim (HAIs Interventions Simulator) and StaViC (Stacked probAbility Visualization & Comparison). The Shiny Apps use inputs from literature or user data, such as transition-specific hazard rates and intervention-related parameters.
Results:
HAISim models the effects of hypothetically improved treatment and infection prevention on outcomes such as the number of lives saved and the number of patient days decreased by simulating a hypothetical scenario based on actual clinical data. StaViC makes it possible to compare potential interventions and their impacts before and after implementation by visualizing the stacked probabilities of patients across various health conditions.
Conclusions:
These tools bridge methodological rigor and practical implementation, offering hospitals a flexible framework to prioritize cost-effective IPC strategies.
More Related Videos
06:55Inverse Probability of Treatment Weighting Propensity Score using the Military Health System Data Repository and National Death Index
Published on: January 8, 2020
08:36Author Spotlight: Evaluating the Adjuvant Efficacy and Safety of Angong Niuhuang Pill in Viral Encephalitis Treatment
Published on: April 19, 2024
Related Concept Videos
Healthcare Associated Infections II: Preventive Measures
The best practices for preventing healthcare-associated infections include hand hygiene, patient risk...
Interpreting Run Charts
Types of Biopharmaceutical Studies: Controlled and Non-Controlled Approaches
Non-controlled studies, commonly employed for initial exploration, lack a control group, rendering them susceptible to biases and external influences. In contrast,...
Steps in Outbreak Investigation
Comparing the Survival Analysis of Two or More Groups
Healthcare Associated Infections I: Iatrogenic, Exogenic and Endogenic
HAIs significantly increase the cost of health care. Extended stays in healthcare institutions, increased disability, increased costs of medications, including specialized antibiotics, and prolonged recovery times add to the patient's expenses and the healthcare institution and funding bodies.