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Updated: Mar 19, 2026

Performing Data Mining And Integrative Analysis Of Biomarker in Breast Cancer Using Multiple Publicly Accessible Databases
Published on: May 17, 2019
External validation of a data-driven algorithm to identify breast cancer recurrences from administrative healthcare
Silvia Mancini1, Fabiola Giudici2, Lauro Bucchi1
1Emilia-Romagna Cancer Registry, Romagna Cancer Institute, IRCCS Istituto Romagnolo per lo Studio dei Tumori (IRST) Dino Amadori, Meldola, Forlì, Italy.
Introduction:
Population-based data on the incidence of breast cancer (BC) recurrence are scarce, because tracking the relevant information is resource-consuming. We report the external validation of a data-driven case-finding algorithm to identify selected treatment and procedure codes relating to BC recurrences from administrative healthcare data.
Methods:
We linked a cancer registry-based cohort of BC patients from the Emilia-Romagna (northern Italy) regional hospital discharge and outpatient care databases, and we ran the algorithm. We compared the algorithm-determined incidence and temporal pattern of recurrences during 10 years of follow-up with those obtained with a manual clinical chart review.
Results:
The algorithm had a 92.3% (95% confidence interval: 87.2%; 95.8%) sensitivity, a 98.0% (97.0%; 98.8%) specificity, a 88.1% (82.4%; 92.5%) positive predictive value and a 98.8% (97.9%; 99.3%) negative predictive value. The two curves of subhazard rates of total recurrences showed a good degree of overlapping and both exhibited the expected bimodal temporal pattern, with a peak between the 2nd and the 3rd year of follow-up and another between the 8th and the 9th year. The algorithm-based 10-year cumulative incidence function of recurrence was 15.8% (13.7%; 18.1%) versus 15.0% (13.0%; 17.3%). The algorithm captured with good precision the temporal pattern of recurrence by molecular profile. The design of the algorithm excluded the recurrences (11.1% of the total) detected during the first 12 months (HER2-negative BC) and 24 months (HER2-positive BC) after the diagnosis.
Conclusions:
This validation study demonstrates that identifying breast cancer recurrences from administrative healthcare data is feasible and sufficiently reliable.
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