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Updated: Mar 20, 2026

Annotation of Plant Gene Function via Combined Genomics, Metabolomics and Informatics
Published on: June 17, 2012
Linking Plant Metabolomics with Fungal Functional Dynamics Reveals a Noncanonical S-R-C Adaptive Trajectory
Peilin Chen1,2, John W Taylor3, Cheng Gao1,2
1State Key Laboratory of Microbial Diversity and Innovative Utilization, Institute of Microbiology, Chinese Academy of Sciences, Beijing, China.
Plant leaf metabolites guide fungal community succession, shifting from stress-tolerator to ruderal and competitor strategies. This study reveals how leaf development influences fungal adaptation and function in crop phyllosphere environments.
Area of Science:
- Plant-microbe interactions
- Fungal ecology
- Metabolomics
Background:
- Phyllosphere plant-fungal interactions are vital for crop health.
- The interplay between leaf metabolite dynamics and fungal functional succession is not well understood.
Purpose of the Study:
- To investigate how developmental shifts in sorghum leaf metabolomes influence fungal life-history strategies.
- To understand the role of leaf metabolites in shaping fungal community dynamics.
Main Methods:
- Field-based holo-omics approach combining genomics, transcriptomics, and metabolomics.
- Analysis of sorghum leaf metabolomes across different developmental stages.
- Assessment of fungal community composition and functional traits.
Main Results:
- Leaf metabolomes drive a temporal trajectory of fungal strategies: stress-tolerator (S), ruderal (R), and competitor (C).
- Antifungal metabolites in young leaves select for S-strategists; maltose abundance during flowering promotes R-strategists.
- Mature plants' secondary metabolites support C-strategists; asynchrony observed between taxonomic and functional diversity.
Conclusions:
- Developmental stage-specific leaf metabolomes are key determinants of phyllosphere fungal adaptation and functioning.
- Metabolite dynamics orchestrate fungal community assembly and functional trait expression.
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