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Updated: Jul 16, 2026

High-Throughput, Multi-Image Cryohistology of Mineralized Tissues
Published on: September 14, 2016
Diversity over scale: Whole-slide image variety enables H&E foundation model training with fewer patches
Christoph Bosch1, John K L Wong2, Martin Paulikat3
1PAICON GmbH, Heidelberg, Germany.
Abstract:
Rapid progress in computational pathology is increasingly driven by vision foundation models pretrained on vast histopathology datasets. Whereas recent efforts have prioritized training on an ever-larger amount of patches, we take an alternative approach focused on data diversity. Our foundation model, Athena, was initialized from a pretrained model and trained on just 115 million tissue patches (282 k slides), several times fewer than recent histopathology foundation models. Rather than relying on patch volume or complex sampling heuristics, we maximize data diversity by randomly selecting only a moderate number of patches per whole-slide image from our diverse internal repository, which spans multiple countries, institutions, and scanner types. Evaluated on a single patch-level benchmark and four slide-level downstream tasks (two molecular and two morphological), Athena approaches the state-of-the-art and even surpasses several models trained on substantially larger datasets. This indicates that diversity across whole-slide images, rather than patch quantity alone, drives learning in histopathology foundation models.
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