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MolViewStories: Interactive molecular storytelling.

Terézia Slanináková1,2, Zachary Charlop-Powers3, Viktoriia Doshchenko1,4

  • 1National Centre for Biomolecular Research, Faculty of Science, Masaryk University, Brno, Czechia.

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Summary
This summary is machine-generated.

MolViewStories offers an open-source platform for creating interactive molecular visualizations with narrative elements. This tool enhances scientific communication and education by making complex molecular data more accessible and engaging for diverse audiences.

Keywords:
Mol* ViewerMolViewSpecPDBinteractive molecular visualizationmolecular storytellingopen‐source softwarereproducible visualizationstructural biologyweb‐based tools

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Area of Science:

  • Biochemistry
  • Computational Chemistry
  • Scientific Visualization

Background:

  • Communicating molecular structures and data is challenging due to limitations of static figures and complex visualization tools.
  • A need exists for accessible, interactive platforms for molecular data representation.

Purpose of the Study:

  • To introduce MolViewStories, an open-source, web-based platform for creating and sharing interactive, narrative-driven molecular visualizations.
  • To extend the MolViewSpec standard for enhanced storytelling capabilities, including animations and synchronized commentary.
  • To leverage WebGL and WebXR for efficient 3D rendering and immersive experiences.

Main Methods:

  • Development of an open-source, web-based platform (MolViewStories).
  • Extension of the MolViewSpec standard to support animations, interactive descriptions, and audio.
  • Integration of the Mol* Viewer utilizing WebGL for 3D rendering and WebXR for VR/AR.
  • Provision of both graphical and command-line interfaces for narrative construction.
  • Implementation of sharing, exporting, and templating functionalities for stories.

Main Results:

  • MolViewStories enables the creation of reproducible, narrative-driven molecular visualizations.
  • The platform supports interactive elements, animations, and synchronized audio commentary.
  • Visualizations are rendered efficiently using WebGL, with options for immersive VR/AR experiences via WebXR.
  • Stories can be shared online, exported locally, or distributed as self-contained packages.
  • Persistent URLs and template functionalities promote collaboration and content reuse.

Conclusions:

  • MolViewStories effectively addresses the limitations of traditional molecular communication methods.
  • The platform enhances the accessibility, reproducibility, and engagement of molecular data for research, education, and outreach.
  • Interactive, web-based storytelling represents a powerful approach to molecular data dissemination.