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Droplet Barcoding-Based Single Cell Transcriptomics of Adult Mammalian Tissues
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Machine learning-driven transcriptomic and single-cell profiling of programed cell death patterns in colon cancer.

Jian-Ou Du1, Qing-Ke Huang2, Xue-Cheng Sun2

  • 1Department of Gastroenterology, Yongjia County Traditional Chinese Medicine Hospital, Yongjia, China.

Science Progress
|March 19, 2026
PubMed
Summary

This study reveals disulfidptosis and anoikis are key in colon cancer progression. A new colon cancer death index (CCDI) shows prognostic value, identifying potential therapeutic targets.

Keywords:
Colon canceranoikisdisulfidptosisprognosisprogramed cell death

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Area of Science:

  • Oncology
  • Molecular Biology
  • Genomics

Background:

  • Colon cancer is a leading global malignancy with poor prognosis in advanced stages.
  • Programmed cell death (PCD) is crucial in colon cancer, but its regulatory network is not fully understood.

Purpose of the Study:

  • To systematically analyze the PCD regulatory network in colon cancer.
  • To develop a novel prognostic index for colon cancer based on PCD patterns.

Main Methods:

  • Analysis of bulk and single-cell transcriptomic data from GEO and TCGA.
  • Application of machine learning algorithms to identify key PCD patterns and construct a combined cell death index (CCDI).
  • Functional enrichment, immune infiltration, nomogram, and pseudotime trajectory analyses.

Main Results:

  • Disulfidptosis and anoikis were identified as critical PCD patterns impacting colon cancer prognosis.
  • The novel CCDI model demonstrated superior prognostic prediction compared to existing models.
  • Disulfidptosis and anoikis were enriched in endothelial cells (ECs), with six key genes identified as regulators of ECs phenotypic transition.

Conclusions:

  • Disulfidptosis and anoikis play significant roles in colon cancer, and the CCDI offers valuable prognostic insights.
  • The study provides new therapeutic targets by elucidating ECs phenotypic transition and regulatory genes in colon cancer.