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Application of Artificial Intelligence in MedDRA Coding: A Practical Exploration from Clinical Data Management
Charles Yan1, Ruier Yang2, Huaihai Yan2
1Clinical Data Science Center, Hengrui Pharmaceutical Co., Ltd., Shanghai, 201203, China. charles.yan@hengrui.com.
Background:
Traditional manual MedDRA coding in clinical data management (CDM) faces persistent challenges, including suboptimal site data quality, terminology complexity, low efficiency, inconsistent outcomes, frequent dictionary updates, and regulatory timeliness pressures-all of which hinder trial progress and compliance.
Objective:
This study aimed to identify applicable artificial intelligence (AI) technologies for MedDRA coding, validate their performance in core CDM scenarios, and propose solutions for technical and regulatory hurdles.
Methods:
Conducted from January 2025 to April 2025, the study utilized real-world adverse event (AE) data from Hengrui Pharmaceutical's trials: 200 English/200 Chinese AE records (spelling error detection) and 2712 unique AE terms from a Phase II Chinese oncology trial (automated coding). A RAG-AI-Agent integrated framework was developed, incorporating integrated data processing (EDC-MedCoding integration), Large Language Models (LLMs; DeepSeek-R1/V3, Gemini 2.5 Pro, Grok3), Retrieval-Augmented Generation (RAG), and AI-Agent technologies. Performance was evaluated via Precision, Recall, coding time, and workload metrics.
Results:
DeepSeek-V3 (task-optimized non-reasoning LLM) achieved 100% Precision in both languages for spelling detection; real-world validation yielded 85.1% Precision and ~ 70% manual review workload reduction. The automated coding system reduced average coding time by 48.7% (8.0 → 3.9 min/record) with 95.8% coverage of AE terms, while maintaining 70%precision against manual gold standards. Compliance was ensured via local deployment and 21 CFR Part 11-aligned audit trails.
Conclusions:
The AI-enhanced framework significantly improves CDM efficiency, consistency, and compliance. Despite limitations (oncology-only validation, narrow language scope, synonym library dependence), it provides a replicable model for pharmaceutical digital transformation, accelerating drug development and enhancing patient safety through high-quality clinical data.
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