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    This study introduces a novel framework using a scale-free transformer for schizophrenia (SZ) diagnosis from brain functional networks (BFNs). The method enhances accuracy and robustness in multi-site fMRI data by integrating scale-free properties and causal graph construction.

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    Area of Science:

    • Neuroimaging
    • Artificial Intelligence
    • Psychiatric Disorders

    Background:

    • Transformer models are used for schizophrenia (SZ) diagnosis from brain functional networks (BFNs) using fMRI data.
    • Existing methods overlook scale-free properties, hindering the capture of BFN topology.
    • Multi-site data heterogeneity necessitates source-free domain adaptation (DA) due to data sharing restrictions.

    Purpose of the Study:

    • To propose a source-free DA framework integrating a scale-free transformer encoder for improved SZ classification.
    • To enhance robustness against multi-site data variability by leveraging intrinsic inter-regional dependencies.
    • To identify discriminative temporal regions offering insights into SZ neural mechanisms.

    Main Methods:

    • Pre-training a transformer encoder on labeled source domains with a scale-free prior to bias attention towards hub nodes.
    • Utilizing causal graph construction from inter-regional interactions and perturbing causal structures via random permutation and counterfactual interventions.
    • Employing entropy minimization for joint optimization of the encoder and predictor to learn domain-invariant representations.

    Main Results:

    • The proposed method achieved superior performance compared to 23 other methods across two SZ datasets, with accuracies of 87.18%±0.91% and 88.39%±0.13%.
    • Ablation studies confirmed the significant contributions of causal, permutation, counterfactual, and entropy minimization constraints.
    • Identified discriminative temporal regions provided novel insights into the dysfunctional neural mechanisms in SZ.

    Conclusions:

    • The developed source-free DA framework effectively addresses challenges in multi-site BFN analysis for SZ diagnosis.
    • Integrating scale-free priors and causal inference enhances model robustness and diagnostic accuracy.
    • The findings offer potential for improved understanding and diagnosis of schizophrenia through advanced neuroimaging analysis.