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Disruption of Mitophagy-Related Gene Expression in Gestational Diabetes Mellitus: A Transcriptomic and Machine
Souhaib Bouati1, Shaima Ameen1, Nour Al Dain Marzouka2
1Department of Biological Sciences, College of Medicine and Health Sciences, Khalifa University, Abu Dhabi, UAE, kustar.ac.ae.
Gestational diabetes mellitus (GDM) involves mitophagy defects, with MUL1, PINK1, TOMM7, and ATF4 genes downregulated in placental and cord blood. These mitophagy genes may serve as biomarkers for GDM.
Area of Science:
- Mitochondrial biology
- Genetics
- Reproductive medicine
Background:
- Gestational diabetes mellitus (GDM) is a pregnancy complication associated with adverse outcomes.
- Mitochondrial dysfunction is implicated in GDM pathogenesis.
- The role of mitophagy in GDM is not well understood.
Purpose of the Study:
- To investigate the expression and regulation of mitophagy-related genes (MRGs) in GDM.
- To identify potential biomarkers for GDM using transcriptomic data.
Main Methods:
- Analysis of publicly available RNA-seq datasets (GSE203346, GSE154414, GSE154377).
- Differential expression analysis of 65 MRGs using edgeR and DESeq2.
- Machine learning for temporal expression modeling and classification.
Main Results:
- Four key MRGs (MUL1, PINK1, TOMM7, ATF4) were consistently downregulated in GDM placental tissue and cord blood.
- Temporal regulation patterns of these MRGs were disrupted in GDM pregnancies.
- Functional enrichment revealed impaired mitochondrial import, autophagy, and oxidative stress responses in GDM.
Conclusions:
- Mitophagy dysregulation is an early and persistent feature of GDM.
- MUL1, PINK1, TOMM7, and ATF4 are potential biomarkers and therapeutic targets for GDM.
- Tissue-specific analysis is crucial, as MRG alterations were not observed in maternal plasma.
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