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Thalamus: a real-time system for synchronized, closed-loop multimodal behavioral and electrophysiological data
Jarl Haggerty1, Qasim Qureshi1, Ellie D Gabriel1
1Department of Neurosurgery, Perelman School of Medicine, University of Pennsylvania, Philadelphia, PA, USA.
Communications Engineering
|March 26, 2026
Summary
We developed Thalamus, an open-source platform for synchronized multimodal data capture in neurosurgery. This tool enhances brain-computer interface development and neurological care through precise neural and behavioral data analysis.
Area of Science:
- Neuroscience
- Biomedical Engineering
- Medical Technology
Background:
- Precise, synchronized multimodal data capture is vital for understanding brain function.
- Advancing brain-computer interface (BCI) technology requires integrated neurosurgical data.
- Existing clinical environments lack unified systems for real-time neural and behavioral data recording.
Purpose of the Study:
- To introduce Thalamus, an open-source software platform for multimodal data capture in neurosurgical settings.
- To enable synchronous recording and real-time analysis of neural and behavioral data.
- To facilitate the development of closed-loop experiments and advanced analysis of motor functions.
Main Methods:
- Developed Thalamus, an open-source platform using a modular, node-based pipeline.
- Integrated common clinical sensors (pulse oximeters, inertial sensors, EMG, electrophysiology).
- Utilized a tiered Python and C++ architecture for flexibility and high-resolution sensor support.
Main Results:
- Thalamus enables synchronous recording of neural and behavioral data with sub-millisecond precision.
- The platform supports integration and concurrent analysis of diverse, high-resolution data streams.
- Validation experiments confirmed Thalamus's capability for robust data integration and synchronization.
Conclusions:
- Thalamus offers a powerful tool for enhancing neurosurgical research and clinical applications.
- Its compatibility with existing hardware facilitates adoption in clinical environments.
- The platform paves the way for data-driven neurological care and personalized treatment strategies.

