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GHMS-CycleGAN: Graph-Based Hierarchical Multi-stain CycleGAN for Stain Normalization and Classification in Digital
Mohamed Elmanna1, Ahmed Elsafty2, Yomna Ahmed2
1Department of Biomedical Engineering and Systems, Faculty of Engineering, Cairo University, Cairo University St, Giza, 12613, Egypt.
Novel deep learning methods normalize digital pathology images, improving classification accuracy for histopathology, red blood cell (RBC), and white blood cell (WBC) images despite staining variations.
Area of Science:
- Digital pathology and medical imaging analysis
- Artificial intelligence in healthcare
- Computational pathology
Background:
- Digital pathology (DP) offers computer-aided diagnosis (CAD) tools using deep learning (DL).
- Staining variations and scanner distortions degrade DL-based CAD system performance.
- Robust image normalization is crucial for reliable DL models in pathology.
Purpose of the Study:
- To introduce novel stain and scan normalization methods for histopathology, RBC, and WBC image classification.
- To develop a framework using hierarchical multi-stain CycleGAN (HMS-CycleGAN) and graph-based HMS-CycleGAN (GHMS-CycleGAN).
- To evaluate the impact of normalization on downstream image classification tasks.
Main Methods:
- Proposed HMS-CycleGAN and GHMS-CycleGAN for multi-stain and color normalization.
- Exploited hierarchical and network structures in DP images for normalization mapping.
- Validated on diverse histopathology, RBC, and WBC datasets from multiple scanners and institutions.
Main Results:
- HMS-CycleGAN demonstrated superior robustness and consistency across staining variations compared to state-of-the-art methods.
- Normalization methods consistently improved classification performance over unnormalized classifiers.
- Achieved 84.05% accuracy on Wilds Camelyon and 51.06% F1-score for WBC classification.
- HMS-CycleGAN and GHMS-CycleGAN reached 80-91% F1-scores for cross-scanner RBC classification.
Conclusions:
- Image normalization is vital for building robust and generalizable DL models in digital pathology.
- The proposed HMS-CycleGAN and GHMS-CycleGAN methods significantly enhance DL-based image classification performance.
- These normalization techniques address key challenges in digital pathology, paving the way for improved diagnostic tools.
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