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Published on: July 3, 2020
Basic Baseline model design choices can substantially influence performance in collaborative forecast hubs.
Ehsan Suez1,2, Spencer J Fox1,2,3
1Institute of Bioinformatics, University of Georgia, Athens, GA, USA.
Optimizing baseline models in outbreak forecasting significantly improves accuracy. A specific flatline model using recent transformed data outperformed standard benchmarks, highlighting the need for transparency in forecasting methods.
Area of Science:
- Epidemiology
- Public Health
- Computational Biology
Background:
- Outbreak forecasting aids public health decision-making during epidemics.
- Collaborative forecast hubs are the standard for real-time epidemic predictions.
- Baseline models serve as crucial benchmarks within these hubs but their design is often subjective and understudied.
Purpose of the Study:
- To evaluate the impact of subjective Baseline model design decisions on forecast performance.
- To identify optimal Baseline model specifications for trend forecasting.
- To compare trend baseline models with seasonal baseline models for specific surveillance targets.
Main Methods:
- Retrospective forecasting was performed using multiple years of data for COVID-19, influenza, and RSV hospital admissions, and weighted influenza-like illness (wILI).
- Three key Baseline specification decisions were evaluated: amount of historical data, data transformation, and forecast variant (flatline vs. drift).
- Trend baseline models were compared to a seasonal baseline model for wILI data.
Main Results:
- Model specification significantly altered forecast performance across all targets.
- An optimal performing model was identified as a flatline model using 6-12 transformed recent observations.
- This optimal model outperformed the current standard Baseline by an average of 9.6% and a seasonal baseline by 32.3%.
Conclusions:
- Subjective Baseline design choices materially influence forecast accuracy and model rankings within collaborative hubs.
- Increased transparency in Baseline model specifications is necessary.
- Routine inclusion of multiple benchmark models in forecast hubs is recommended.