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Updated: Jun 29, 2026

Targeted Plasma Membrane Delivery of a Hydrophobic Cargo Encapsulated in a Liquid Crystal Nanoparticle Carrier
Published on: February 8, 2017
A physics-informed machine learning framework for predicting and mitigating doxorubicin nanocarrier toxicity in
Abbas Rahdar1, Sonia Fathi-Karkan2,3,4
1Department of Physics, University of Zabol, Zabol, Iran. a.rahdar@uoz.ac.ir.
Abstract:
The clinical utility of doxorubicin (DOX) has been widely hampered by a dose-dependent systemic toxicity, in particular cardiotoxicity. While nanocarrier systems represent encouraging solutions, their optimization is not an easy task due to complex, nonlinear relationships between physicochemical properties and biological outcomes. This study presents a hybrid computational framework that incorporates both classical machine learning and physics-informed machine learning to predict and optimize DOX-loaded nanocarrier cytotoxicity toward normal cells. For this purpose, we compiled an extensive dataset of 77 unique nanocomposite systems with their detailed physicochemical characterizations and biological evaluations. Several ML models were trained and compared, whereas a Physics-Informed Neural Network implemented domain knowledge such as drug release kinetics, colloidal stability constraints, and diffusion limitations. The proposed PINN model showed better predictive capability (R2 = 0.89, RMSE = 0.14) compared to conventional ML methods. SHAP analysis revealed that zeta potential and size are the most governing features on cytotoxicity. Bayesian optimization revealed an optimal design space: sizes of 120-150 nm, zeta potentials between - 25 and - 35 mV, loading efficiency of 5-10%, and encapsulation efficiency > 85%. Experimental validation on independent studies confirmed the model's accuracy with prediction errors < 3%. The proposed PIML framework offers a robust yet interpretable method for rational nanocarrier design that significantly improves the development of safer chemotherapeutic delivery systems by reducing the reliance on empirical optimizations.
Insights
This study developed a hybrid computational framework using machine learning to predict and optimize doxorubicin (DOX) nanocarrier safety. The physics-informed neural network model accurately guides the design of safer chemotherapy delivery systems.
Area of Science:
- Biomedical Engineering
- Computational Chemistry
- Nanotechnology
Background:
- Doxorubicin (DOX) efficacy is limited by dose-dependent systemic toxicity, particularly cardiotoxicity.
- Nanocarrier systems offer solutions but optimizing their complex physicochemical properties for biological outcomes is challenging.
Purpose of the Study:
- To develop a hybrid computational framework integrating classical and physics-informed machine learning (PIML) to predict and optimize the cytotoxicity of DOX-loaded nanocarriers toward normal cells.
- To identify key physicochemical properties governing nanocarrier safety and establish an optimal design space for reduced toxicity.
Main Methods:
- Compiled an extensive dataset of 77 nanocomposite systems with physicochemical and biological data.
- Trained and compared various machine learning (ML) models, including a Physics-Informed Neural Network (PINN) incorporating drug release kinetics, colloidal stability, and diffusion.
- Utilized SHAP analysis for feature importance and Bayesian optimization for design space exploration.
Main Results:
- The PINN model demonstrated superior predictive capability (R² = 0.89, RMSE = 0.14) over conventional ML methods.
- Zeta potential and particle size were identified as the most critical factors influencing cytotoxicity.
- An optimal design space was determined: sizes of 120-150 nm, zeta potentials of -25 to -35 mV, loading efficiency of 5-10%, and encapsulation efficiency >85%.
Conclusions:
- The proposed PIML framework provides a robust and interpretable method for rational nanocarrier design.
- This approach significantly enhances the development of safer chemotherapeutic delivery systems by minimizing empirical optimization.
- Experimental validation confirmed the model's accuracy, with prediction errors below 3%.
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