Divergent Microbial Community and Pathogenicity at a University-Urban Interface: A Comparative Analysis
Xinyu Liu1, Nan Xiao1, Jianghao Yu1
1State Key Laboratory of Microbial Technology, Microbial Technology Institute, Shandong University, Qingdao 266237, China.
Microorganisms
|March 28, 2026
Summary
Urban environments harbor more diverse pathogens and high-risk antimicrobial resistance genes compared to university campuses. Campus microbial communities are dominated by antibiotic-resistant Staphylococcus species, with resistance traits on mobile plasmids, indicating high transfer potential.
Area of Science:
- Environmental microbiology
- Antimicrobial resistance
- Genomics
Background:
- Population density influences microbial community structure and evolution of antimicrobial resistance.
- High-touch surfaces in public spaces can harbor diverse microbial communities and potential pathogens.
Purpose of the Study:
- To compare microbial community composition and pathogenic potential on high-touch surfaces in urban and university settings.
- To investigate the prevalence of antimicrobial resistance and virulence factors in bacterial isolates.
Main Methods:
- Metagenomic analysis of high-touch surfaces.
- Isolation and characterization of 188 bacterial species.
- Antibiotic susceptibility testing, hemolytic assays, and whole-genome sequencing.
Main Results:
- Off-campus urban sites exhibited higher bacterial richness and more diverse potential pathogens, including carbapenemase genes.
- On-campus sites were dominated by antibiotic-resistant Staphylococcus species, with enriched beta-lactam resistance determinants.
- 84.7% of isolates showed antimicrobial resistance, and 35.1% of Staphylococcus isolates were hemolytic.
- Resistance and virulence traits were frequently located on mobile plasmids, suggesting high horizontal gene transfer potential.
Conclusions:
- Population activities shape distinct microbial communities in adjacent environments.
- Urban environments pose a higher risk for diverse pathogens and resistance genes.
- Monitoring high-risk resistance determinants in densely populated university settings is crucial.
Related Concept Videos
Introduction to Microbial Ecology
49
Microbial ecology examines the complex web of interactions and diversity among microorganisms within various ecosystems. This field seeks to understand how microbial populations adapt to and influence their environments and how these interactions shape broader ecological processes. Microbes are integral to ecosystem function, participating in nutrient cycling, energy flow, and the maintenance of environmental homeostasis.An ecosystem represents a dynamic interaction between living organisms...
49
Introduction to the Human Microbiota
48
Microorganisms colonize various regions of the human body, including the mouth, nasal passages, throat, stomach, intestines, urogenital tract, and skin. The total number of microbial cells is estimated to range from 10¹³ to 10¹⁴—comparable to, or exceeding, the number of human somatic cells. This host–microbiome relationship has led to the conceptualization of humans as supraorganisms, wherein microbial communities perform vital roles in development, immunity,...
48
Colonisation of Pathogens
31
Pathogen colonization of host tissues is a critical step in the development of infectious diseases. Various pathogenic microorganisms, including bacteria, fungi, viruses, and protozoa, have evolved complex strategies to attach to, invade, and persist within host environments. These mechanisms enable pathogens to establish infections, evade immune responses, and resist antimicrobial treatments.Attachment to Host CellsIn bacteria, colonization typically begins with adherence to host epithelial...
31
Microbiota of the Urogenital Tract
23
The human urogenital system, once thought to be sterile in healthy individuals, is now recognized as a complex microbial habitat. Advancements in molecular sequencing techniques have revealed that even in healthy adults, the kidneys and bladder harbor microbial populations similar to those found in the distal urethra, albeit in much lower abundance. These resident microorganisms, while generally innocuous, can become opportunistic pathogens under conditions that alter the urogenital...
23
Microbial Interactions: Cooperation
36
Microbial cooperation involves beneficial interactions in which different species work together for individual or mutual advantage. These interactions can profoundly influence ecological dynamics and evolutionary processes, and they are essential to many pathogenic and symbiotic relationships.Nematode–Bacteria CooperationA striking example is the relationship between the Gram-negative bacterium Xenorhabdus nematophila and the parasitic nematode Steinernema carpocapsae. Juvenile nematodes...
36
Microbial Interactions: Mutualism
37
Mutualism is a symbiotic interaction in which all participating organisms benefit. These relationships can be obligate or facultative and are fundamental to ecosystem functions across diverse biological systems.Plant–Fungi MutualismOne well-known example is the association between plant roots and mycorrhizal fungi, such as Rhizophagus species. The fungal hyphae penetrate the root hairs and the epidermis, forming an extensive hyphal network that establishes a symbiotic association. Through...
37


