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Evaluation of a Reliable Biomarker in a Cecal Ligation and Puncture-Induced Mouse Model of Sepsis
Published on: December 9, 2022
Evaluating the Diagnostic Value and Molecular Mechanism of Energy Metabolism-Related Gene PEA15 in Sepsis
Xiao Yu1,2, Congrui Liu1, Libin Jia1
1Department of General Practice, The Second Affiliated Hospital of Xi'an Jiaotong University, Xi'an, Shaanxi, People's Republic of China.
Purpose:
Sepsis, a life-threatening condition with high mortality, is closely linked to energy metabolism (EM) and immune-inflammatory responses. However, the precise mechanisms remain incompletely understood. This research aims to identity EM-related genes (EMRGs) in sepsis and examine the diagnostic potential and molecular mechanisms through machine learning and single-cell RNA sequencing (scRNA-seq).
Methods:
This study utilized the GSE65682 and GSE95233 datasets from the Gene Expression Omnibus (GEO) for analysis. Kaplan-Meier (KM) survival analysis and receiver operating characteristic (ROC) diagnostic analysis were applied to identify key EM-related genes. A sepsis model with overexpression of key genes was developed, and RNA sequencing (RNA-Seq) was employed to identify associated genes. Additionally, scRNA-seq was conducted to examine cell type distributions and gene expression profiles in sepsis.
Results:
ATM and PEA15 were identified as critical genes. Overexpression of PEA15 alleviated septic symptoms. In sepsis, alterations in immune cell infiltration, particularly T follicular helper cells, were correlated with key gene expression. Core genes (RSAD2, IFI44, MX1, IFIT3, and ISG15), closely associated with the key genes, were also identified. Single-cell analysis further delineated the cell type profiles and core gene expression patterns in sepsis. From a translational perspective, PEA15 addresses a critical gap in sepsis management. Its strong prognostic and diagnostic performance, validated through KM and ROC analyses, positions it as a promising biomarker for early sepsis detection-essential for improving patient outcomes through timely intervention.
Conclusion:
PEA15 and its associated core genes represent potential therapeutic targets: modulating PEA15 expression or targeting the underlying molecular network may help restore immune balance and reduce septic damage, offering a novel approach for targeted therapeutic strategies.
