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Updated: Apr 1, 2026

Evidence-based Knowledge Synthesis and Hypothesis Validation: Navigating Biomedical Knowledge Bases via Explainable AI and Agentic Systems
Published on: June 13, 2025
Med.ai ASK: an agentic system for biomedical question answering.
Nhung T H Nguyen1, Dmytro S Lituiev1, Zhimin Liu1
1Data Science and Digital Health, Innovative Medicine, Johnson & Johnson, Titusville, NJ, United States.
Med.ai ASK, an AI research co-pilot, provides accurate biomedical answers by dynamically retrieving information and using tool-driven reasoning. This agentic system enhances scientific knowledge discovery and reduces AI hallucinations.
Area of Science:
- Biomedical Informatics
- Artificial Intelligence in Science
- Natural Language Processing
Background:
- Generative AI is revolutionizing scientific knowledge access.
- Current AI solutions struggle with the nuance of biomedical research questions.
- There is a need for reliable, grounded AI-powered biomedical information retrieval.
Purpose of the Study:
- To develop Med.ai ASK, an agentic question-answering system for biomedical inquiries.
- To enhance accuracy and reliability in AI-generated biomedical responses.
- To create a system that parses complex research questions effectively.
Main Methods:
- Utilized the ReAct framework and Self-Discover for tool-calling and reasoning.
- Integrated multiple biomedical knowledge bases, vector databases, APIs, and NER tools.
- Ingested 44 million biomedical documents and evaluated on diverse QA datasets.
Main Results:
- Med.ai ASK demonstrates strong performance, accuracy, and reduced hallucinations compared to other AI solutions.
- Human and LLM evaluations show aligned assessments, supporting its reliability.
- The agent is interpretable, effectively selects tools, and is deployed in a production platform with over 1600 users.
Conclusions:
- Med.ai ASK dynamically integrates information retrieval tools for accurate and factual biomedical answers.
- The agentic design provides robust interpretative capabilities crucial for the biomedical domain.
- This system represents a significant advancement in AI-assisted scientific research.
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