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Estimating correlations across tasks in experimental psychology
Shanglin Yang1, Jeffrey N Rouder2
1Department of Cognitive Science, University of California, Irvine, CA, 92697, USA.
Bayesian hierarchical models estimate individual differences by modeling measurement error. The LKJ prior offers the most accurate correlation estimates, while the SIW provides a faster, practical alternative for large models.
Area of Science:
- Psychology
- Statistics
- Computational Modeling
Background:
- Individual-difference psychology relies on understanding performance covariation across tasks.
- Pearson correlation is scale-invariant but susceptible to measurement noise.
- Bayesian hierarchical models (BHMs) directly model measurement error for improved accuracy.
Purpose of the Study:
- Compare the robustness of three common priors (inverse Wishart [IW], scaled inverse Wishart [SIW], LKJ) in BHMs.
- Assess the impact of prior specification and variable inclusion on correlation estimates.
- Evaluate trade-offs between accuracy and computational speed.
Main Methods:
- Simulation studies to evaluate prior performance under various conditions.
- Visualization of prior distributions.
- Analysis of posterior estimates for correlation recovery and bias.
Main Results:
- All priors accurately recover correlations in low-dimensional settings when correctly specified.
- Inverse Wishart (IW) priors exhibit significant bias when variance is misspecified.
- LKJ priors are robust to scale misspecification and generally provide accurate estimates.
- SIW priors show similar bias patterns to IW but less severe.
- Adding variables stabilizes IW but causes shrinkage in SIW and LKJ.
- LKJ priors are computationally intensive compared to IW and SIW.
Conclusions:
- The LKJ prior is recommended for accurate correlation estimation in BHMs.
- The SIW prior offers a computationally efficient alternative for large-scale analyses.
- Prior choice significantly impacts BHM results, necessitating careful consideration.
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