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Updated: Apr 4, 2026

MicroRNA-based Regulation of Picornavirus Tropism
Published on: February 6, 2017
Structural dynamics between Argonaute-2 and CK1α promote target RNA release in microRNA-mediated silencing.
Ankur Garg1,2, Leah Braviner1,3, Armend Axhemi1,2
1W. M. Keck Structural Biology Laboratory, Cold Spring Harbor Laboratory, One Bungtown Road, Cold Spring Harbor, New York, 11724 USA.
Argonaute proteins, essential for gene silencing via microRNAs (miRNAs), undergo structural changes during target RNA binding. This process, involving CK1α phosphorylation, facilitates efficient and rapid RISC complex turnover for gene regulation.
Area of Science:
- Molecular Biology
- Structural Biology
- Gene Regulation
Background:
- Argonaute (Ago) proteins and microRNAs (miRNAs) form the RISC complex, crucial for post-transcriptional gene silencing.
- Target RNA binding to RISC triggers CK1α-mediated phosphorylation, releasing the target and enabling RISC reuse for efficient gene silencing.
Purpose of the Study:
- To elucidate the complete structural dynamics of human Ago2 during miRNA guide and target RNA binding.
- To visualize the conformational changes in RISC that facilitate CK1α binding and subsequent phosphorylation.
Main Methods:
- High-resolution structural analysis of human Ago2 complexed with guide-target RNA.
- Visualization of dynamic conformational changes in RISC during target engagement and phosphorylation.
Main Results:
- Ago2 binds guide-target RNA in an untwisted conformation, revealing the structural basis of miRNA-mediated gene silencing.
- Progressive base pairing between the guide and target RNA induces conformational changes, opening RISC to CK1α binding and initiating Ago2 phosphorylation.
- Complete supplementary pairing establishes a PAZ-CK1α interface, leading to hierarchical phosphorylation of the eukaryotic insertion (EI), which promotes RISC turnover.
Conclusions:
- The study provides a comprehensive structural understanding of how RISC facilitates miRNA-mediated gene silencing and efficient turnover.
- Phosphorylation of the EI domain, coupled with guide-target unwinding, is key to target RNA release and rapid RISC complex recycling.
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