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Harmonizing brain rhythms: cortex-wide neuronal dynamics underpin quasi-periodic patterns in resting-state fMRI.
Biorxiv : the Preprint Server for Biology
|April 3, 2026
Summary
Quasi-periodic patterns (QPPs) in functional magnetic resonance imaging (fMRI) reflect underlying neural activity. Simultaneous wide-field calcium imaging and fMRI confirm that blood-oxygen-level dependent (BOLD) fMRI QPPs originate from preceding slow waves of neural activity.
Area of Science:
- Neuroscience
- Systems Neuroscience
- Neuroimaging
Background:
- Functional magnetic resonance imaging (fMRI) detects whole-brain activity, including resting-state patterns like quasi-periodic patterns (QPPs).
- These fMRI-QPPs exhibit consistent spatiotemporal dynamics, are conserved across species, and are altered in neurological diseases.
- The precise neural origins of blood-oxygen-level dependent (BOLD) fMRI signals, particularly QPPs, remain incompletely understood due to the indirect nature of the BOLD signal.
Purpose of the Study:
- To investigate the neural underpinnings of fMRI-QPPs using simultaneous wide-field calcium (WF-Ca 2+ ) imaging and fMRI.
- To establish a direct link between neural activity patterns and BOLD-fMRI QPPs.
Main Methods:
- Simultaneous recording of cortex-wide neural activity using WF-Ca 2+ imaging and whole-brain fMRI in animal models.
- Application of QPP analysis to both WF-Ca 2+ and fMRI data streams.
- Comparative analysis to identify spatiotemporal correlations between neural activity waves and BOLD signal patterns.
Main Results:
- A robust, time-locked correlation was identified between QPPs detected via WF-Ca 2+ imaging and fMRI-QPPs.
- These findings demonstrate that BOLD fMRI QPPs are a direct reflection of preceding, slower waves of neural activity.
- The spatial and temporal precision of this relationship was confirmed.
Conclusions:
- BOLD fMRI QPPs have a direct neural origin in slow waves of neural activity.
- This study validates the hypothesis that fMRI-QPPs accurately represent underlying neural dynamics.
- The multimodal approach provides a powerful tool for understanding the neural basis of brain activity patterns detected by fMRI.

