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Updated: Apr 4, 2026

Lung CT Segmentation to Identify Consolidations and Ground Glass Areas for Quantitative Assesment of SARS-CoV Pneumonia
Published on: December 19, 2020
AI-Assisted Pneumonia Detection, Localisation and Report Generation from Chest X-rays
Federico E Boiardi1, Antoine D Lain1, Joram M Posma1
1Section of Bioinformatics, Division of Systems Medicine, Department of Metabolism, Digestion and Reproduction, Imperial College London, W12 0NN, United Kingdom.
Abstract:
Pneumonia detection in chest X-rays (CXRs) is complicated by high inter-observer variability and overlapping radiographic patterns. While deep learning (DL) solutions show promise, limitations in generalisability and explainability hinder clinical adoption. We address these challenges by introducing a holistic DL-based computeraided diagnosis (CAD) pipeline for pneumonia detection, localisation, and structured report generation from CXRs. We curated the largest composite of publicly available CXRs to date (N=922,634), of which were used for training. MIMIC-CXR radiology reports were relabelled using a local large language model (LLM), positing that LLM-derived pneumonia labels would yield higher diagnostic sensitivity than the provided rule-based natural language processing (rNLP) labels. DenseNet-121 classifiers were trained on four configurations: MIMIC-CXR (rNLP), MIMIC-CXR (LLM), and each supplemented with VinDr-CXR data. Gradient-weighted Class Activation Mapping (Grad-CAM) provided visual explainability and lung zone-based localisation. LLM-driven relabelling significantly improved human-label agreement (96.5% vs 72.5%, P=1.66×10-11). The best-performing model (MIMIC-CXR (LLM) + VinDr-CXR) achieved 82.08% sensitivity and 81.97% precision, surpassing both radiologist sensitivity ranges ( 64-77.7%) and CheXNet's pneumonia F1-score (43.5%). Grad-CAM localisation attained a moderate F1-score of 52.9% (sensitivity=65.7%, precision=44.3%), confirming focus alignment with pathological lung regions while highlighting areas for refinement. These findings demonstrate that LLM-driven label curation, combined with DL, can exceed conventional rNLP and radiologist performance, advancing high-quality data integration in predictive medical imaging. Clinically, our pipeline offers rapid triage, automated report drafting, and real-time pneumonia surveillance; tools that can streamline radiology workflows and mitigate diagnostic errors.
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