Chromosome-level genome assembly of Rhynchium brunneum (Fabricius, 1793) (Hymenoptera: Vespidae)
Jing Wang1, Shulin He1, Bin Chen1
1Chongqing Key Laboratory of Control and Utilization of Vector Insects, Institute of Entomology and Molecular Biology, College of Life Science, Chongqing Normal University, Chongqing, 401331, China.
Abstract:
The wasps of Rhynchium exemplify solitary vespid predators controlling Lepidopteran pests through venom-mediated paralysis, with their venom possessing significant medicinal potential. As dominant models within the species-rich subfamily Eumeninae representing 70% of Vespidae diversity, they provide critical insights into sociality evolution and biocontrol mechanisms. To boost research on Vespidae, we used PacBio long-read, short-read RNA-seq (Illumina) and Hi-C scaffolding technologies to create a high-quality chromosome-level genome assembly for Rhynchium brunneum, an important solitary insect. We obtained a 328.90 Mb assembly with a Scaffold N50 size of 15.98 Mb. We detected 96.2% Benchmarking Universal Single-Copy Orthologues (BUSCO) in the genome assembly, which contains 51.77% repetitive sequences and has 12,999 protein-coding genes annotated. In R. brunneum, we identified 173 gene expansions and 274 genes that underwent contraction or loss. The high-quality genome of R. brunneum provides a valuable genetic resource for future research in evolution, molecular biology, and applied studies.
Related Concept Videos
Lampbrush Chromosomes
LBCs are made up of two pairs of conjugating homologous chromatids. Each chromatid consists of alternatively positioned regions of condensed-inactive chromatin and loosely placed-active side loops, which can be contracted and extended. The loops...
Genome Annotation and Assembly
Diversity of Protists III
Polytene Chromosomes
Heterochromatin
Constitutive heterochromatin: It is a highly compact region of chromatin that is mostly concentrated in the centromere and telomere. Unlike euchromatin, the amino acid at...


