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Next Generation Sequencing for the Detection of Actionable Mutations in Solid and Liquid Tumors
Published on: September 20, 2016
Probing the Cancer Mutational Landscape of KMT2 Regulatory Subunits
Sabrina Grégoire1,2, Sara Chow1,2, Monika Joshi1,2
1Ottawa Institute of Systems Biology, University of Ottawa, Ottawa, Canada.
Abstract:
Members of the Lysine MethylTransferase 2 (KMT2) family are often abnormally expressed and mutated in many cancers. Similarly, several mutations listed in cancer databases map to key functional regions of KMT2 regulatory subunits, such as WD repeat domain 5 (WDR5), Retinoblastoma binding protein 5 (RbBP5), absent-small-homeotic-2-like (ASH2L), and DumPY-30 (DPY-30). In this study, we report the systematic characterization of cancer-associated mutations that map to regions important for the WDR5/RbBP5/ASH2L/DPY-30 (WRAD) complex formation. Both binding and thermal stability assays show that several cancer-related mutations do not affect ASH2L binding to DPY-30 or RbBP5. A subset of gain-of-function mutants highlights the role of long-range networks of interactions underlying RbBP5 binding by ASH2L. Parallel analysis of RbBP5 mutations shows additional variants that weaken its interactions with WDR5. Finally, systematic mapping of RbBP5 residues interacting with WDR5 defines the optimal WDR5-binding motif and shows that introducing hydrophobic residues beyond the central VDV sequence increases binding affinity. Overall, these findings reveal surprising gain-of-function mutations in ASH2L and provide a framework for targeting this epigenetic hub therapeutically.
Insights
Cancer mutations in KMT2 regulatory subunits like WDR5, RbBP5, ASH2L, and DPY-30 were characterized. Some mutations revealed gain-of-function effects in ASH2L, offering new therapeutic targets for cancer.
Area of Science:
- Epigenetics
- Molecular Biology
- Cancer Research
Background:
- Lysine MethylTransferase 2 (KMT2) family proteins are frequently altered in various cancers.
- Mutations often affect key functional regions of KMT2 regulatory subunits, including WDR5, RbBP5, ASH2L, and DPY-30.
Purpose of the Study:
- To systematically characterize cancer-associated mutations impacting the WDR5/RbBP5/ASH2L/DPY-30 (WRAD) complex formation.
- To investigate the functional consequences of these mutations on protein interactions and complex stability.
Main Methods:
- Binding assays to assess protein-protein interactions.
- Thermal stability assays to evaluate complex integrity.
- Systematic mutational analysis of key residues within the WRAD complex.
Main Results:
- Several cancer mutations did not disrupt ASH2L binding to DPY-30 or RbBP5.
- Identified gain-of-function ASH2L mutants influencing RbBP5 binding through long-range interactions.
- Discovered RbBP5 mutations weakening WDR5 interactions and defined the optimal WDR5-binding motif.
Conclusions:
- Cancer-associated mutations can lead to gain-of-function in ASH2L, impacting epigenetic regulation.
- Understanding these mutations provides a basis for developing novel therapeutic strategies targeting the WRAD complex.
- Defined the WDR5-binding motif of RbBP5, aiding in the design of targeted therapies.
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