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Visualizing DNA Damage Repair Proteins in Patient-Derived Ovarian Cancer Organoids via Immunofluorescence Assays
Published on: February 24, 2023
PARP16 is a Druggable Regulator of Ribosome MARylation and Protein Homeostasis in Ovarian Cancer Cells
Sridevi Challa1,2,3, Morgan Dasovich1, Jonathan C Abshier1
1Laboratory of Signaling and Gene Regulation, Cecil H. and Ida Green Center for Reproductive Biology Sciences, University of Texas Southwestern Medical Center, Dallas, TX 75390, USA.
Abstract:
Cytosolic NAD synthesis supports ovarian cancer growth by enabling PARP16-dependent mono(ADP-ribosyl)ation (MARylation) of ribosomal proteins, thereby fine-tuning translation and maintaining protein homeostasis. While genetic depletion of PARP16 disrupts ribosome MARylation and impairs tumor cell growth, the therapeutic potential of pharmacologic PARP16 inhibition in this pathway remains unexplored. Here, we characterized the effects of DB008, a tool compound that functions as a selective inhibitor of PARP16, in ovarian cancer cells. Biochemical analyses demonstrated that PARP16 undergoes NAD -dependent auto-MARylation and that NMNAT-2 supplies NAD to support this activity. DB008 potently inhibited PARP16 auto-MARylation in vitro. In ovarian cancer cells, DB008 engaged PARP16, reduced its MARylation, and decreased ribosome-associated MARylation. Consistent with PARP16 depletion, DB008 enhanced global protein synthesis, increased protein aggregation, and suppressed cell growth and anchorage-independent colony formation. CRISPR-mediated deletion of the PARP16 gene in ovarian cancer cells abolished the effects of DB008 on translation, protein aggregation, and proliferation, demonstrating on-target activity. Moreover, cells expressing a PARP16 mutant resistant to DB008 were unaffected by inhibitor treatment, further confirming that the cellular effects of DB008 require on-target inhibition. Finally, DB008 significantly inhibited tumor growth in OVCAR3 xenografts, with on-target engagement of PARP16 in the xenograft tumors. Collectively, these findings establish PARP16 as a druggable regulator of ribosome MARylation and protein homeostasis in ovarian cancer and provide pharmacologic proof-of-concept that disrupting ribosomal MARylation impairs tumor growth.
Insights
Cytosolic NAD synthesis fuels ovarian cancer by enabling PARP16-dependent ribosomal protein MARylation. Inhibiting PARP16 with DB008 disrupts this process, impairing tumor growth and offering a potential therapeutic strategy.
Area of Science:
- Biochemistry
- Molecular Biology
- Oncology
Background:
- Cytosolic NAD synthesis is crucial for ovarian cancer progression via PARP16-mediated ribosomal protein MARylation.
- PARP16 regulates translation and protein homeostasis, but its therapeutic inhibition is unexplored.
Purpose of the Study:
- To investigate the therapeutic potential of pharmacologic PARP16 inhibition in ovarian cancer.
- To characterize the effects of the selective PARP16 inhibitor DB008 on ovarian cancer cells and tumor growth.
Main Methods:
- Biochemical assays to assess PARP16 auto-MARylation and DB008 inhibition.
- In vitro studies using ovarian cancer cells treated with DB008.
- CRISPR-mediated gene deletion to confirm on-target effects.
- OVCAR3 xenograft models to evaluate in vivo efficacy.
Main Results:
- DB008 potently inhibited PARP16 auto-MARylation in vitro and reduced MARylation in ovarian cancer cells.
- DB008 treatment led to increased protein synthesis, aggregation, and suppressed cell growth.
- On-target activity was confirmed by CRISPR-mediated PARP16 deletion and resistant mutant studies.
- DB008 significantly inhibited tumor growth in OVCAR3 xenografts with demonstrated on-target engagement.
Conclusions:
- PARP16 is a druggable target regulating ribosome MARylation and protein homeostasis in ovarian cancer.
- Pharmacologic inhibition of PARP16 and disruption of ribosomal MARylation represent a viable therapeutic strategy for ovarian cancer.
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