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Updated: Apr 11, 2026

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Isolation of Next-Generation Gene Therapy Vectors through Engineering, Barcoding, and Screening of Adeno-Associated Virus AAV Capsid Variants
Published on: October 18, 2022
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Receptor-guided AAV Tropism Engineering via MATCH.
Nolan Graham1, Satheesh Kumar1, Joseph Rainaldi1,2
1Department of Bioengineering, University of California San Diego, CA USA.
Biorxiv : the Preprint Server for Biology
|April 10, 2026
Summary
Researchers developed MATCH, a method to control adeno-associated virus (AAV) tropism by conjugating targeting proteins. This enables precise gene delivery, enhancing viral targeting for therapeutic applications.
Area of Science:
- Biochemistry
- Molecular Biology
- Gene Therapy
Background:
- Controlling viral tropism is crucial for effective gene delivery.
- Adeno-associated viruses (AAVs) are promising gene therapy vectors but lack precise targeting.
- Current methods for retargeting AAVs are often inefficient or lack control.
Purpose of the Study:
- To develop a modular method for programmable retargeting of AAVs.
- To enable site-specific covalent conjugation of targeting proteins to AAV capsids.
- To engineer AAV vectors with enhanced tropism for specific cell types and tissues.
Main Methods:
- Developed MATCH (Modulation of AAV Tropism through Conjugation to Homing proteins), a biochemical method using SpyTag/SpyCatcher system for protein conjugation.
- Incorporated SpyTag peptide into AAV capsid loops for site-specific attachment of SpyCatcher-linked targeting proteins.
- Utilized mosaic AAV-DJ and AAV9 capsids with controlled SpyTag incorporation for tunable ligand display.
Main Results:
- MATCH-AAVs conjugated to anti-CD3 antibodies efficiently transduced human T cells in vitro.
- TfR1-targeted MATCH-AAV9 showed up to an 84-fold increase in brain transduction in vivo compared to wild-type AAV9.
- Demonstrated receptor-dependent transduction and blood-brain barrier crossing with TfR1-targeted vectors.
- Developed a one-pot "Mix-and-MATCH" production strategy yielding functional, targeted AAVs.
Conclusions:
- MATCH provides a versatile and generalizable synthetic-biology approach for rational AAV tropism engineering.
- This method enables scalable production of custom AAV vectors for research and therapeutic applications.
- Programmed retargeting of AAVs via covalent protein conjugation offers a powerful tool for gene therapy development.
Keywords:
AAV capsid engineeringBlood-brain barrierImmune cell engineeringSpyTag/SpyCatcherTargeted gene deliveryTransferrin receptor (TfR1)
