A deep-learning-based pipeline for automatic fusion of CT coronary angiogram and stress perfusion CMR

Wenting Jiang1, Ming-Yen Ng1, Tsun-Hei Sin1

  • 1Department of Diagnostic Radiology, The University of Hong Kong, Hong Kong, China.

Medical Physics
|April 10, 2026
PubMed

Insights

This study introduces a deep learning pipeline that integrates CT coronary angiography (CTCA) and cardiovascular magnetic resonance (CMR) images for improved coronary artery disease (CAD) diagnosis. The automated framework effectively fuses CTCA and CMR data, enhancing the identification of affected vessels and myocardial territories.

Area of Science:

  • Medical Imaging
  • Artificial Intelligence in Medicine
  • Cardiovascular Disease Research

Background:

  • Accurate diagnosis of coronary artery disease (CAD) relies on evaluating coronary artery constriction and myocardial ischemia.
  • Combining CT coronary angiography (CTCA) and stress cardiovascular magnetic resonance (CMR) imaging offers a comprehensive approach to assess both coronary stenosis and myocardial perfusion.

Purpose of the Study:

  • To develop an automated deep learning pipeline for integrating CTCA and CMR images.
  • To enhance the accuracy of identifying affected coronary vessels and their corresponding myocardial territories in CAD patients.

Main Methods:

  • A deep learning pipeline was developed, featuring models for automatic CTCA reorientation and CTCA-CMR image registration of the left ventricle (LV) wall.
  • The pipeline utilized a 3D spatial co-registration model (Reorientation STN) and a 2D nonrigid spatial deformation network (Nonrigid SDN) with cross-modal supervision.
  • The system was trained and validated on 447 image pairs from 75 patients and tested on 18 subjects.

Main Results:

  • The pipeline achieved high accuracy in LV wall reorientation (Dice Similarity Coefficient [DSC] of 0.66 ± 0.04) and registration between CTCA and CMR images (DSC of 0.92 ± 0.03).
  • Quantitative metrics demonstrated robust performance, including an aspect ratio (AR) of 0.94 ± 0.03 and low long-axis deviation angles (axial: 1.19 ± 0.83, coronal: 1.54 ± 0.79).

Conclusions:

  • An automated framework was successfully developed to fuse cardiac CTCA and CMR imaging.
  • This integrated approach shows significant potential for improving the diagnostic accuracy and management of coronary artery disease.
Abstract