Coronavirus NSP5 protease cleaves CCDC50 to evade antiviral autophagy

Ke Li1,2, Hongyun Wei1,2, Wenqiu Yin1,2

  • 1State Key Laboratory of Agricultural Microbiology, College of Veterinary Medicine, Huazhong Agricultural University, Wuhan, China.

Autophagy
|April 11, 2026
PubMed

Insights

The selective autophagy receptor CCDC50 restricts porcine deltacoronavirus (PDCoV) replication by degrading its envelope protein. However, PDCoV

Area of Science:

  • Virology
  • Cellular Biology
  • Immunology

Background:

  • Selective autophagy is crucial for innate antiviral immunity, utilizing specific receptors to target viral components for lysosomal degradation.
  • Porcine deltacoronavirus (PDCoV) employs its NSP5 protease to evade this essential cellular defense mechanism.

Purpose of the Study:

  • To investigate the role of the selective autophagy receptor CCDC50 in antiviral defense against PDCoV.
  • To elucidate the mechanism by which PDCoV evades CCDC50-mediated autophagy.

Main Methods:

  • Immunoblotting and immunoprecipitation assays to detect protein interactions and cleavage.
  • Autophagy assays to monitor the degradation of viral proteins.
  • Site-directed mutagenesis to identify critical residues for protein interaction and cleavage.

Main Results:

  • CCDC50 acts as a selective autophagy receptor, recognizing K63-linked polyubiquitinated PDCoV envelope (E) protein and mediating its autophagic degradation.
  • PDCoV NSP5 protease cleaves CCDC50 at a conserved site (glutamine 171), disrupting its interaction with ubiquitin and MAP1LC3/LC3.
  • This cleavage impairs CCDC50-mediated autophagic degradation of the E protein, thereby promoting viral replication.

Conclusions:

  • CCDC50 possesses a previously unrecognized antiviral function against coronaviruses.
  • Coronavirus NSP5 proteases promote viral infection by proteolytically inactivating CCDC50, a key receptor in antiviral autophagy.

Related Concept Videos

Inhibitors of Viral Protein Synthesis01:30

Inhibitors of Viral Protein Synthesis

Protein synthesis is indispensable for viral replication, as viruses lack the cellular machinery required for this process and must hijack the host's translational apparatus. In response, host cells deploy a critical innate immune defense involving interferons, specialized cytokines that play a central role in inhibiting viral propagation.Upon viral detection, infected cells release interferons that bind to receptors on adjacent uninfected cells, activating the JAK-STAT signaling pathway and...
34
Autophagic Cell Death01:18

Autophagic Cell Death

Christian de Duve discovered “autophagy,” a process in which cellular components are engulfed by membrane-bound organelles called autophagosomes. The autophagosomes then fuse with lysosomes to digest the enclosed contents. Autophagy is generally activated in cells to prevent cell death. However, cell death is triggered when the damage is beyond repair.
Autophagy and Apoptosis
Autophagy can activate apoptosis. In normal conditions, the autophagy activating protein Beclin-1 and...
5.1K
Autophagy01:27

Autophagy

Autophagy is a self-digesting process by which a cell protects itself from threats both within and outside the cell, ranging from abnormal proteins to invading bacteria. In this process, obsolete components of the cell and invading microbes are degraded by hydrolytic enzymes active in an acidic environment of the lysosomal lumen.
An autophagic pathway consists of a series of signaling events activated in response to diverse stress and physiological conditions such as food deprivation,...
6.2K
The Antiviral System of Bacteria and Archaea: CRISPR01:23

The Antiviral System of Bacteria and Archaea: CRISPR

CRISPR stands for Clustered Regularly Interspaced Short Palindromic Repeats is a adaptive immune system found in bacteria and archaea that protects against viral infections. This system enables prokaryotic cells to identify, remember, and neutralize foreign genetic elements, primarily bacteriophages, by storing fragments of the invader’s DNA as a genetic memory.The CRISPR immune response begins during an initial infection. Cas (CRISPR-associated) proteins play a central role in this...
1.0K
Anaphase Promoting Complex00:50

Anaphase Promoting Complex

The stepwise destruction of specific proteins is necessary for the progression and completion of the cell cycle. Such proteins are ubiquitinated by ubiquitin ligases and then subsequently destroyed by the proteasome. The SCF (Skp1/Cullin/F-box) and the anaphase-promoting complex (APC) are two important ubiquitin ligases involved in cell cycle progression. While SCF is active throughout the cell cycle, APC gets activated during metaphase to anaphase transition. Cdc20 or Cdh1 binds to APC and...
3.5K
cAMP-dependent Protein Kinase Pathways01:25

cAMP-dependent Protein Kinase Pathways

Cyclic Adenosine Monophosphate (cAMP) is an essential second messenger that activates protein kinase A (PKA) and regulates various biological processes. A single epinephrine molecule binds to GPCR and activates several heterotrimeric G proteins, each stimulating multiple adenylyl cyclase, amplifying the signal, and synthesizing large numbers of cAMP molecules. Small changes in cAMP concentration affect PKA activity. The binding of four cAMP molecules induces a conformational change in PKA,...
9.3K