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Updated: Apr 14, 2026

A Method for Screening and Validation of Resistant Mutations Against Kinase Inhibitors
Published on: December 7, 2014
Drug sensitivity testing of patient-derived bone sarcomas identifies selective kinase inhibitors for patients with
Christina Linder-Stragliotto1, Panagiotis Tsagkozis2, Swapnil Potdar3
1Department of Molecular Medicine and Surgery, Karolinska Institutet, Stockholm, Sweden. Christina.linder-stragliotto@regionstockholm.se.
Objective:
This study aimed to investigate the feasibility and predictive value in performing ex vivo drug sensitivity testing on bone sarcomas from patients with refractory disease and identify agents with potential therapeutic benefit.
Methods:
A cohort of 7 osteosarcomas (OS) and 4 Ewing sarcoma (ES) patient-derived cells (PDCs) were screened against a library of oncological drugs, gene panel sequencing and mRNA expression arrays. Drug responses were correlated to the molecular characteristics of specific sarcoma subtypes and patient response to therapy.
Results:
OS PDCs showed heterogeneous drug sensitivity, with observed responses for mTOR, PKC, MAPK and CDK inhibitors that correlated with the histological subtype and genotype of the primary tumor. Two of 4 ES PDCs displayed morphological dichotomy as separate Ews-Fli1 positive spheroid and adherent populations. These ES PDCs showed comparable responses to most of the oncological drugs but differential sensitivity to rapalogs and SMAC-mimetics. In both, OS and ES, the drug sensitivity of PDCs correlated to the patient response to chemotherapy.
Conclusion:
Drug sensitivity testing of PDCs from bone sarcomas is a valuable tool for a rapid identification of potential treatments, in otherwise genetically complex group of tumors where genome-based assays are difficult to implement. Clones with different phenotypes can outgrow in PDC cultures and can represent clonal evolution that give raise to tumor recurrence.
Insights
Ex vivo drug sensitivity testing on bone sarcoma patient-derived cells (PDCs) effectively identifies potential treatments for refractory cancers. This approach offers a valuable alternative to complex genomic assays for discovering therapeutic agents.
Area of Science:
- Oncology
- Cancer Biology
- Pharmacology
Background:
- Bone sarcomas, including osteosarcoma (OS) and Ewing sarcoma (ES), present significant treatment challenges, particularly in refractory cases.
- Genomic-based assays for these genetically complex tumors can be difficult to implement.
- Identifying effective therapeutic agents for refractory bone sarcomas is crucial.
Purpose of the Study:
- To assess the feasibility and predictive value of ex vivo drug sensitivity testing on bone sarcoma patient-derived cells (PDCs).
- To identify potential therapeutic agents for patients with refractory bone sarcomas.
- To correlate drug responses with molecular characteristics and patient outcomes.
Main Methods:
- Screening of 7 osteosarcoma (OS) and 4 Ewing sarcoma (ES) PDCs against a library of oncological drugs.
- Utilizing gene panel sequencing and mRNA expression arrays for molecular characterization.
- Correlating drug responses with tumor histology, genotype, and patient response to therapy.
Main Results:
- OS PDCs exhibited heterogeneous drug sensitivity, with responses to mTOR, PKC, MAPK, and CDK inhibitors correlating with tumor subtype and genotype.
- ES PDCs showed morphological dichotomy and differential sensitivity to specific drug classes (e.g., rapalogs, SMAC-mimetics).
- Drug sensitivity of PDCs correlated with patient response to chemotherapy in both OS and ES.
Conclusions:
- Ex vivo drug sensitivity testing of bone sarcoma PDCs is a valuable tool for rapid treatment identification.
- This method is particularly useful for genetically complex tumors where genome-based assays are challenging.
- PDC cultures can reveal phenotypic clones, potentially indicating clonal evolution and tumor recurrence mechanisms.
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