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Combined Recombinase Polymerase Amplification CRISPR/Cas12a Assay for Detecting Fusarium oxysporum f. sp. cubense Tropical Race 4
Published on: November 14, 2025
Genome-Wide Association Study Reveals Significant Single-Nucleotide Polymorphism Marker Detected for Fusarium Wilt
Ajay Dhungana1, Don R La Bonte1, Phillip A Wadl2
1School of Plant, Environmental, and Soil Sciences, Louisiana State University AgCenter, 104 Sturgis Hall, Baton Rouge, LA, U.S.A.
Abstract:
Fusarium wilt is caused by the soilborne fungus Fusarium oxysporum f. sp. batatas and affects sweetpotato by causing significant damage to crop yield and quality. The use of resistant cultivars is one of the most effective ways to reduce disease incidence. Screening for the disease is time-consuming and resource-draining. Trait-linked molecular markers represent an efficient, stable, and alternative screening approach. In this study, a genome-wide association study (GWAS) was conducted on a Louisiana sweetpotato breeding population to identify novel loci associated with Fusarium wilt resistance and to gain insights underlying resistance. Phenotypic data for disease traits were collected for 254 F1 diverse lines over 2 years. The sweetpotato accessions were genotyped using the 3K DArTag marker panel. The GWAS identified one marker that was significantly associated with Fusarium wilt resistance, providing a putative target for future validation and potential use in marker-assisted selection (MAS). These findings offer valuable resources for MAS and lay the groundwork for developing Fusarium wilt-resistant sweetpotato cultivars.
Related Concept Videos
Single Nucleotide Polymorphisms-SNPs
Genome-wide Association Studies-GWAS
GWAS does not require the identification of the target gene involved in...

