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Isolation and Analysis of Microbial Communities in Soil, Rhizosphere, and Roots in Perennial Grass Experiments
Published on: July 24, 2018
Legacy effects of herbicides on soil nitrifying guilds exposed to drought
Laura Johanna Müller1, Aurélien Saghaï1, Christopher Jones1
1Department of Forest Mycology and Plant Pathology, Swedish University of Agricultural Sciences, 75651 Uppsala, Sweden.
Abstract:
Micro-organisms are essential for the functioning of agricultural soils but face increasing stress due to pollution and climate change. However, direct and legacy effects of agrochemicals on non-target micro-organisms are poorly considered in environmental risk assessment. Here, we set up a two-phase microcosm experiment to assess the effect of the herbicides clopyralid, metribuzin, and tembotrione (phase 1) on the abundance and activity of ammonia and nitrite oxidizing micro-organisms involved in nitrification, a key step in soil N cycling, and how it influences their response to subsequent drying and rewetting stress (phase 2). Pesticide exposure in phase 1 did not affect the nitrifying guilds and nitrification activity. By contrast, drying-rewetting affected the abundance of the different guilds, with ammonia-oxidizing archaea and Nitrospira-type nitrite oxidizers showing low resistance to rewetting, but with minor differences between herbicide-treated and no-herbicide treated soils. Legacy effects of herbicide exposure were instead captured by the soil nitrate pools, where differences between droughted and control soils appeared larger in the no-herbicide than in the herbicide-treated soils, potentially indicating differences in drought-coping strategies depending on prior stress exposure. Our results highlight that multiple stressor scenarios can reveal effects not captured by end-point measurements in risk assessment procedures.
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