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Updated: Apr 18, 2026

Clonogenic Assay: Adherent Cells
Published on: March 13, 2011
Anchorage-independent and faster growth in clonal population from UV-irradiated NER-deficient cells
Paola Perucca1, Anna Tricarico1, Martina Furfaro1
1Dipartimento di Medicina Molecolare, Università degli studi di Pavia, Pavia, Italy.
Abstract:
Human tumours are characterized by both molecular and functional heterogeneity, which drives cancer cell growth. In this context, the selection of subclones that acquire enhanced proliferative capacity and resistance to pharmacological treatments represents a necessary step in tumour progression. In the presence of DNA damage, efficient signalling and lesion removal are crucial in preventing the accumulation of genomic mutations. In Nucleotide Excision Repair (NER) pathways, the loss of interaction between DDB2 and PCNA (referred to as DDB2PCNA-) results in genomic instability, delayed damage removal and activation of the epithelial-to-mesenchymal transition (EMT) transcriptional program. In this study, we demonstrate that human cellular clones, derived from UV-damaged cells expressing DDB2PCNA-, exhibit behaviours typically associated with tumour heterogeneity. Specifically, these clones show anchorage-independent growth, differences in cell cycle regulation, frequency of atypical mitoses, expression of oncogenes and tumour suppressors and resistance to cisplatin treatment. Taken together, these findings highlight the critical role of DDB2-PCNA interaction in maintaining genome stability and preventing cellular transformation.
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Cells are regularly exposed to mutagens—factors in the environment that can damage DNA and generate mutations. UV radiation is one of the most common mutagens and is estimated to introduce a significant number of changes in DNA. These include bends or kinks in the structure, which can block DNA replication or transcription. If these errors are not fixed, the damage can cause mutations, which in turn can result in cancer or disease depending on which sequences are...

