Bridging the microstructural gap in human connectomics using hierarchical phase-contrast tomography as a reference

Eric Wanjau1,2, Matthieu Chourrout2,3, Chiara Maffei3

  • 1Department of Medical Physics and Biomedical Engineering, University College London, Gower Street, London, WC1E 6BT, United Kingdom.

Insights

Hierarchical Phase-Contrast Tomography (HiP-CT) non-destructively images brain white matter at the microscale. This method reveals greater microstructural complexity than diffusion MRI (dMRI), offering a new tool for connectome research.

Area of Science:

  • Neuroimaging
  • Biophysics
  • Materials Science

Background:

  • Diffusion MRI (dMRI) non-invasively images the human connectome but struggles with micrometer-scale axonal geometries due to water diffusion limitations.
  • Invasive histology methods are destructive and limited to small volumes, highlighting a need for non-destructive 3D microscopic imaging of white matter fiber orientations.

Purpose of the Study:

  • To utilize Hierarchical Phase-Contrast Tomography (HiP-CT) for characterizing white matter architecture at the microscale.
  • To compare HiP-CT derived fiber architecture with dMRI data and assess its potential as a reference modality.

Main Methods:

  • Applied structure-tensor analysis to HiP-CT data to compute fiber Orientation Distribution Functions.
  • Performed tractography analogous to dMRI using HiP-CT derived orientation data.
  • Evaluated the impact of vascular structures on HiP-CT orientation estimates.

Main Results:

  • HiP-CT data revealed substantially greater microstructural complexity in white matter fiber architecture compared to dMRI.
  • Strong correspondence was observed between fiber architecture derived from HiP-CT and dMRI across multiple brain regions.
  • Vascular structures were found to minimally confound HiP-CT orientation estimates despite its label-free nature.

Conclusions:

  • HiP-CT is established as a valuable non-destructive reference modality for imaging microscopic white matter architecture.
  • HiP-CT complements dMRI by providing higher-resolution insights into microstructural complexity.
  • This technique facilitates multi-scale studies of white matter organization and the human connectome.