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Updated: Apr 19, 2026

Robust Ligature-Induced Model of Murine Periodontitis for the Evaluation of Oral Neutrophils
Published on: January 21, 2020
Identification of Key Genes Involved in Lactic Acid Metabolism in Periodontitis Based on Bioinformatics Analysis
Bijun Zhu1, Shi Xu1, Mingyue Cheng1
1Department of Cariology and Endodontics, Nanjing Stomatological Hospital, Affiliated Hospital of Medical School, Institute of Stomatology, Nanjing University, Nanjing, Jiangsu, China.
Abstract:
Lactic acid metabolism correlates with periodontitis progression. Using machine learning (LASSO and SVM-RFE) on GSE16134 and GSE173078 datasets, CFI and COQ2 were identified as key genes, with good diagnostic performance (AUC > 0.75). GSEA linked these genes to MAPK signalling, endocytosis, and ubiquitin-mediated proteolysis. Immune infiltration analysis revealed higher plasma cells and lower CD8 T cells in periodontitis. Molecular docking identified amiodarone as a potential compound with strong binding affinity to CFI and COQ2. The expression trends of CFI (upregulated) and COQ2 (downregulated) were first confirmed in TNF-α/IL-1β-stimulated human periodontal ligament cells and further validated in a rat ligature-induced periodontitis model. These findings suggest that CFI and COQ2 are potential diagnostic biomarkers and therapeutic targets for periodontitis.

