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Combining Time-Stamped Insect Sampling With eDNA-Metabarcoding of Guano to Reconstruct Community Interactions
Tamara R Hartke1, Manus Wittenhorst1,2, Martin Koch3
1Leibniz Institute for the Analysis of Biodiversity Change (LIB), Center for Biodiversity Monitoring and Conservation Science Bonn Germany.
Ecology and Evolution
|April 20, 2026
Summary
This study integrates bat guano DNA with time-stamped insect data to reveal bat foraging behavior. Findings show temporal diet analysis accurately infers prey selection and hunting strategies for conservation.
Area of Science:
- Ecology
- Molecular Biology
- Conservation Biology
Background:
- Predator-prey dynamics are crucial for predicting responses to environmental change.
- Bats, as apex predators, offer insights into ecosystem health by reflecting insect community changes.
- Existing molecular diet studies lack temporal resolution, hindering understanding of bat hunting strategies and prey selection.
Purpose of the Study:
- To investigate the foraging ecology of long-eared bats (Plecotus sp.) by integrating temporal data.
- To overcome limitations of previous studies by combining environmental DNA (eDNA) metabarcoding of bat guano with time-stamped insect metabarcoding.
- To infer prey selection mechanisms and hunting strategies based on temporal foraging patterns.
Main Methods:
- Collected bat guano and time-stamped insect samples using automated Malaise traps.
- Utilized eDNA metabarcoding for both bat guano and insect samples.
- Analyzed and compared prey communities from guano with temporal insect activity data.
Main Results:
- Bat guano prey composition closely matched insect samples collected between 22:00 and 6:00.
- Identified species-specific peak foraging times and prey composition.
- Detected distinct prey selection patterns between Plecotus auritus and Plecotus austriacus, reflecting different hunting strategies.
Conclusions:
- Integrating a temporal dimension into molecular diet analysis allows direct inference of prey selection and foraging behavior from bat guano.
- This approach enhances biodiversity monitoring and provides tools for conservation planning in changing environments.
- The study highlights the importance of temporal data for understanding predator-prey interactions and informing conservation strategies.
Keywords:
Plecotusbiodiversity monitoringbulk sampleschronoecologyeDNA metabarcodingspecies interaction monitoring
