Prolonged KRAS-MAPK Inhibition Induces Interferon Signaling That Promotes Cell State Transition and Confers
Ashenafi Bulle1, Yali Chen1, Huaping Li1
1Division of Oncology, Department of Internal Medicine, Washington University School of Medicine, St. Louis, Missouri.
Abstract:
Acquired resistance limits the therapeutic efficacy of KRAS-MAPK inhibitors in pancreatic ductal adenocarcinoma (PDAC). As transcriptional plasticity and epithelial-to-mesenchymal transition (EMT) have been implicated in resistance, we sought to study the molecular mechanisms driving these changes to uncover actionable vulnerabilities. Sustained KRAS-MAPK inhibition induced interferon (IFN) and NF-κB signaling and promoted cell state change mimicking an EMT state associated with drug resistance. Network analysis identified the IFN-inducible E3 ubiquitin ligase TRIM22 as a central regulator of this response. Mechanistically, TRIM22 promoted proteasomal degradation of IκBα, resulting in sustained NF-κB and EMT program activation that coincided with a basal-like transcriptional cell state. TRIM22 expression was driven by IRF1 and IRF9 following relief of ERK-mediated transcriptional repression during pathway inhibition. EMT induction was accompanied by marked upregulation of TROP2 (TACSTD2), an NF-κB target gene enriched in basal-like PDAC cell states. Combining TROP2-directed antibody-drug conjugate sacituzumab govitecan with KRAS or ERK inhibitors significantly suppressed PDAC tumor growth in xenograft models. Overall, prolonged KRAS-MAPK inhibition activates an IFN-TRIM22-NF-κB axis that drives EMT and therapeutic resistance in PDAC, while revealing TROP2 as a clinically actionable vulnerability to overcome acquired resistance.
Significance:
TRIM22 drives interferon-induced EMT and NF-κB-dependent TROP2 upregulation to drive resistance to KRAS-MAPK inhibition in pancreatic cancer, which can be overcome by combining sacituzumab govitecan with KRAS-MAPK inhibitors.
Insights
Acquired resistance in pancreatic cancer is driven by KRAS-MAPK inhibitors activating an interferon-TRIM22-NF-κB pathway, promoting EMT. Targeting TROP2 with antibody-drug conjugates offers a new strategy to overcome this drug resistance.
Area of Science:
- Oncology
- Molecular Biology
- Cancer Research
Background:
- Acquired resistance to KRAS-MAPK inhibitors is a major challenge in pancreatic ductal adenocarcinoma (PDAC) treatment.
- Transcriptional plasticity and epithelial-to-mesenchymal transition (EMT) are implicated in the development of this resistance.
Purpose of the Study:
- To investigate the molecular mechanisms underlying KRAS-MAPK inhibitor resistance in PDAC.
- To identify actionable vulnerabilities associated with drug resistance.
Main Methods:
- Sustained KRAS-MAPK inhibition in PDAC models.
- Network analysis to identify key regulatory molecules.
- Mechanistic studies on TRIM22, IκBα, and NF-κB signaling.
- Assessment of TROP2 expression.
- Combination therapy studies using KRAS/ERK inhibitors and TROP2-directed antibody-drug conjugates in xenograft models.
Main Results:
- KRAS-MAPK inhibition induced interferon and NF-κB signaling, promoting an EMT-like state and drug resistance.
- TRIM22 was identified as a central regulator, driving IκBα degradation, sustained NF-κB activation, and EMT.
- TRIM22 expression was regulated by IRF1 and IRF9.
- TROP2 was upregulated in basal-like PDAC states and associated with EMT.
- Combination therapy with TROP2-directed ADC and KRAS/ERK inhibitors significantly suppressed PDAC tumor growth.
Conclusions:
- Prolonged KRAS-MAPK inhibition activates an interferon-TRIM22-NF-κB axis, leading to EMT and therapeutic resistance in PDAC.
- TROP2 represents a clinically actionable vulnerability for overcoming acquired resistance in PDAC.
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