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Artificial intelligence (AI) imaging shows promise for pathogen detection, especially under stress. However, inconsistent reporting and lack of standardized benchmarks hinder reproducibility and widespread adoption of these advanced methods.

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Area of Science:

  • Microbiology
  • Computer Science
  • Biotechnology

Background:

  • Traditional pathogen detection methods struggle with microbial signals in challenging environments.
  • Artificial intelligence (AI) offers potential for enhanced microbial signal capture.

Purpose of the Study:

  • To systematically review AI-enabled imaging for pathogen detection.
  • Evaluate AI's performance, application, and methodology in detecting pathogens, particularly under stress conditions.

Main Methods:

  • Systematic literature search across five databases using keywords related to AI, pathogen detection, and imaging.
  • Inclusion criteria based on the PICOS framework, focusing on AI-enhanced microscopy.
  • Data extraction following PRISMA guidelines, capturing biological, imaging, AI, and performance data.

Main Results:

  • 28 studies met inclusion criteria, covering over 40 pathogens (e.g., Salmonella, E. coli).
  • Only three studies examined stress or inactivated pathogen states.
  • Limited reporting of comparator methods and inconsistencies in protocols complicated benchmarking and meta-analysis.

Conclusions:

  • AI-enabled imaging presents a comprehensive approach to pathogen detection from biological and computational viewpoints.
  • Standardized benchmarks and reporting practices are crucial for reproducible and transferable AI-based pathogen detection.